Pairwise Alignments

Query, 574 a.a., Efflux ABC transporter, permease/ATP-binding protein from Sphingobium sp. HT1-2

Subject, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  258 bits (660), Expect = 4e-73
 Identities = 185/547 (33%), Positives = 283/547 (51%), Gaps = 17/547 (3%)

Query: 28  LAIPSGFRLVIDKGFTGGGDISRWFEYLFLLVVILALA----SALRFYFVSWLGERVVAD 83
           L  P  F  VIDK   G    S     L L ++ LA+A    S LR      L  +V A+
Sbjct: 182 LVSPMLFENVIDKVLVGRSLSS--LHVLALAMLALAIAEPAYSYLRNTVFGHLASQVNAE 239

Query: 84  IRSATQANLLRQAPAFFEENRPSEIASRMTADTAIIDQVVGSTVSVALRNLVTGIGGLIY 143
           +      +L+     +F++ +  +I +R+     I   + GST+ + L +L+     L  
Sbjct: 240 LSGRLYRHLVGLPLTYFKQRQTGQIIARVREMAQIRQFLTGSTLMLLL-DLIFVTVFLAV 298

Query: 144 LFVLAPKLAGLLILGIPVIVLTLVTLGRRVRKLSRASQDRLAEVGSVTTEVLGAMKIVQG 203
           +F  A  L  L+I  + +  +  +  G  +RK   +  +  A   +  TE +  ++ ++ 
Sbjct: 299 MFHYASTLTWLVIGSLVIYFVLWLIAGPLIRKKVESEYESDANATTFLTEAVTGIETIKT 358

Query: 204 FGQEGREAARFDATVA---NGFATARQRILLRAVMTAIAFALVFGSITGVLWLGAIDVAA 260
              E R   ++   ++   N    A++  L+     A+   L    +   LW G   V  
Sbjct: 359 TATEHRFLEQWQRILSQQLNRSFDAQKSGLIAGQAIALVQKLTAALL---LWWGVSAVLK 415

Query: 261 GRLSGGSIAAFVLTGGLVAGAFGSLSESWGDLLRGAGAASRLDELMAAEPAIAAPAAPVA 320
           G ++ G + AF +  G V      L++ W D      A  R+ +++  EP   +     +
Sbjct: 416 GEITPGQLVAFNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVGDILD-EPRENSKQGLAS 474

Query: 321 IPTLPQGARLRFDNVHFHYPTRPDQAALNGVTIDIAPGETVAVVGPSGAGKSTLIQLALR 380
           +P L  G  + F N+ F Y     +   N +++ I PG+ + V GPSG+GKSTL +L  R
Sbjct: 475 VPELDGG--IEFSNIRFRYHQDAPEVLAN-LSLKIKPGQFIGVTGPSGSGKSTLTRLLQR 531

Query: 381 FYDPDQGEVQLNDVPLPAADPAALRAAMAMVPQDSVIFAASARDNLRYGKWDASDEEIWA 440
            Y P  G+V ++ + L  ADP +LR  M++V Q+S++F+ S  DN+R  K  ASDEEI  
Sbjct: 532 LYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRLCKPQASDEEIRH 591

Query: 441 AARAANAEAFLRALPQGLDSHLGEGGARLSGGQRQRVSIARALLRDAPILLLDEATSALD 500
           AA+ A A AF+  LP G +  +GE GA LSGGQRQR+++ARALL +  ILLLDEATSALD
Sbjct: 592 AAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQRQRIALARALLVNPRILLLDEATSALD 651

Query: 501 AESEQLVKDALDRLMQGRTTIVIAHRLATVRAADRIIVLDQGRIVEQGDHATLVALGGLY 560
             SE  +   +D + +GRT I IAHRL T+R AD I VLD+G++ E G H  L+A  GLY
Sbjct: 652 YNSEASIMSNMDEICRGRTVISIAHRLNTIRHADNIFVLDKGQVAESGTHEELLAQQGLY 711

Query: 561 ARLASLQ 567
           A+L + Q
Sbjct: 712 AKLWTQQ 718