Pairwise Alignments

Query, 574 a.a., Efflux ABC transporter, permease/ATP-binding protein from Sphingobium sp. HT1-2

Subject, 605 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  307 bits (787), Expect = 7e-88
 Identities = 215/570 (37%), Positives = 315/570 (55%), Gaps = 23/570 (4%)

Query: 13  IAGALTALIVSSAATLAIPSGFRLVIDKGFTGGG-DISRWFEYLFLLVVIL-ALASALRF 70
           IA A+  ++  +A+T AI    +  ++  F     D+       F +  +L  LA+  + 
Sbjct: 38  IALAVLCMLAVAASTSAIAWLMKPAVNDVFARHDRDVLMLIALAFPVAFVLKGLANYGQR 97

Query: 71  YFVSWLGERVVADIRSATQANLLRQAPAFFEENRPSEIASRMTADTAIIDQVVGSTVSVA 130
             ++ +G RVV   R A   +L     AFF + + + + SR T D  ++   + S + V 
Sbjct: 98  TLMNRVGLRVVQRCREALYDHLQGMDIAFFAQQQTAALVSRFTVDLTLLKNTITSGIMVV 157

Query: 131 LRNLVTGIGGLIYLFVLAPKLAGLLILGIPVIVLTLVTLGRRVRKLSRASQDRLAEVGSV 190
            R+ VT +  ++ LF+L  +LA + +   P  VL +  LG+RVRK +R  Q +  ++ ++
Sbjct: 158 GRDAVTMVSLVVSLFLLDIELALIAVTVFPAAVLPIALLGKRVRKAARGMQAQSGQLDAL 217

Query: 191 TTEVLGAMKIVQGFGQEGREAARFDATVANGFATARQRILLRAVMTAIAFALVFGSITG- 249
             +V  A+++V+ +     E AR  ATV   +     R L+R+     A ++V   ++G 
Sbjct: 218 LLQVFQAIRVVKVYNAGEHERARVAATVDRIY-----RHLMRSERIGAAISMVVEILSGF 272

Query: 250 ----VLWLGAIDVAAGRLSGGSIAAFVLTGGLVAGAFGSLSESWGDLLRGAGAASRLDEL 305
               V+  G   V AG L  G+  AF+ +  L+      +         G  A  R+  +
Sbjct: 273 AFAAVVIYGGQRVTAGDLDPGTFFAFITSLFLLYQPIKRIGGVNVVAQEGMAAVERMYGV 332

Query: 306 MAAEPAIA----APAAPVAIPTLPQGARLRFDNVHFHYPTRPDQAALNGVTIDIAPGETV 361
           +   PA+     APA  V       G  + FD+V   YPT+ +  AL+G++     G TV
Sbjct: 333 IDTPPALREGKDAPALVVG------GGEIVFDDVRLTYPTQ-EGPALDGLSFRAPAGATV 385

Query: 362 AVVGPSGAGKSTLIQLALRFYDPDQGEVQLNDVPLPAADPAALRAAMAMVPQDSVIFAAS 421
           A+VG SGAGKST +QL  RFYD D G V ++   + A    +L AA+AMV Q+ ++F  S
Sbjct: 386 ALVGRSGAGKSTALQLVPRFYDADGGRVLIDGQDVRAVTFRSLWAAIAMVTQEIILFDDS 445

Query: 422 ARDNLRYGKWDASDEEIWAAARAANAEAFLRALPQGLDSHLGEGGARLSGGQRQRVSIAR 481
            R N+ YG+  AS  EI  AAR A A  F+ ALP+G D+ +GE G RLSGGQRQR+ IAR
Sbjct: 446 VRANIAYGRPGASQAEIEDAARHAAAHDFILALPEGYDTVIGEQGTRLSGGQRQRLVIAR 505

Query: 482 ALLRDAPILLLDEATSALDAESEQLVKDALDRLMQGRTTIVIAHRLATVRAADRIIVLDQ 541
           A+L++APILLLDEATSALD ESE+ V+ A +RL QGRT IV+AHRL+TV  AD I V+D 
Sbjct: 506 AMLKNAPILLLDEATSALDTESERHVRQAFERLRQGRTCIVVAHRLSTVMNADIIHVIDA 565

Query: 542 GRIVEQGDHATLVALGGLYARLASLQFQDQ 571
           GRIVE G HA L+A GGLYA L +    D+
Sbjct: 566 GRIVESGSHAALLAEGGLYADLCATDLSDE 595