Pairwise Alignments

Query, 574 a.a., Efflux ABC transporter, permease/ATP-binding protein from Sphingobium sp. HT1-2

Subject, 609 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  246 bits (629), Expect = 1e-69
 Identities = 199/601 (33%), Positives = 308/601 (51%), Gaps = 66/601 (10%)

Query: 2   LWRFATRY------PARIAGALTALIVSSAATLAIPSGFRLVI------DKGFTGGGDIS 49
           ++RF   Y      P  +   LTAL+     +L    G  + +      +  F   GD  
Sbjct: 24  IYRFCRHYTRGFELPLALMSILTALLAILEVSLFAFMGDLVDLLASHSPETLFAEQGDKL 83

Query: 50  RWFEYLFLLVV-ILALASALRFYFVSWLGERVVADIRSATQANLLRQAPAFFEENRPSEI 108
                L L+V+ +L L  AL  Y    LG   ++ IR      LL+Q+ AF++ +    I
Sbjct: 84  LLMAVLVLVVIPVLVLLHALVIY-QGLLGNYPMS-IRWLAHRYLLKQSIAFYQNDFAGRI 141

Query: 109 ASRMTADTAIIDQVVGSTVSVALRNLVTGIGGLIYLFVLAPKLAGLLILGIPVIVLTLVT 168
           A+++   +  + + V   + V +  LV       +L +L       L L +P++V  ++ 
Sbjct: 142 ATKVMQTSLAVRETVTKLLDVLVYILV------YFLSMLVIIADADLRLMLPMLVWLMIY 195

Query: 169 LGRR---VRKLSRASQDRLAEVGSVTTEVLGA---MKIVQGFGQEGREAARFDATVANGF 222
           +G +   + KL + S ++     ++T  ++ +   +  V+ F    +EA     ++    
Sbjct: 196 VGLQFYYLPKLKQVSTEQADARSTMTGRIVDSYTNIATVKLFSHTQKEAQYAKESMTGFL 255

Query: 223 ATA-RQRILLRAV---MTAIAFALVFGSITGVLWL--------GAIDVAAG---RLSGGS 267
            T  RQ  L+  +   +  I + L F      +WL        GAI VA     RL+G S
Sbjct: 256 DTVYRQMRLVTGINVSVQVINYLLAFSVAAVSIWLWRDNAITIGAIAVAVSLSLRLNGMS 315

Query: 268 IAAFVLTGGLVAGAFGSLSESWGDLLRGAGAASRLDELMAAEPAIAAPAAPVAIPTLPQG 327
                     +     SL E+ G +  G    SR   +  ++ A           T+ +G
Sbjct: 316 --------QWIMWEISSLFENIGTVADGMNTLSRPTSVQDSDNASQL--------TVSKG 359

Query: 328 ARLRFDNVHFHYPTRPDQAALNGVTIDIAPGETVAVVGPSGAGKSTLIQLALRFYDPDQG 387
             + F+ V FHY        +  + + I PGE V +VG SGAGKSTL+ L +RF+D +QG
Sbjct: 360 -EIAFNRVSFHYGEA--SGVIEDLDLKIKPGEKVGLVGRSGAGKSTLVNLLMRFHDVEQG 416

Query: 388 EVQLNDVPLPAADPAALRAAMAMVPQDSVIFAASARDNLRYGKWDASDEEIWAAARAANA 447
            + ++   +   +  +LRA + MV QD+ +   S RDN+RYGK DAS+EE+  A R A A
Sbjct: 417 SITIDGQNIREVEQDSLRANIGMVTQDTSLLHRSIRDNIRYGKPDASEEELENAIRQAQA 476

Query: 448 EAFLRALPQ-----GLDSHLGEGGARLSGGQRQRVSIARALLRDAPILLLDEATSALDAE 502
             F++ L       GLD+ +GE G +LSGGQRQR++IAR LL++APILLLDEATSALD+E
Sbjct: 477 YEFIQGLSDPEGNHGLDAQVGERGVKLSGGQRQRIAIARVLLKNAPILLLDEATSALDSE 536

Query: 503 SEQLVKDALDRLMQGRTTIVIAHRLATVRAADRIIVLDQGRIVEQGDHATLVALGGLYAR 562
            E  ++++L +LM+G+T I IAHRL+T+ A DR+IVLDQG+IVEQG H  L+  GG+YA+
Sbjct: 537 IEAAIQESLYQLMEGKTVIAIAHRLSTIAAMDRLIVLDQGKIVEQGTHQELIKQGGIYAQ 596

Query: 563 L 563
           L
Sbjct: 597 L 597