Pairwise Alignments

Query, 568 a.a., Inner membrane protein translocase and chaperone YidC, long form from Sphingobium sp. HT1-2

Subject, 541 a.a., membrane protein insertase YidC from Vibrio cholerae E7946 ATCC 55056

 Score =  225 bits (573), Expect = 4e-63
 Identities = 171/574 (29%), Positives = 269/574 (46%), Gaps = 61/574 (10%)

Query: 1   VDDKKNIILAVLLTAAILFGWPYISEHFFPAANPPATKIEGGKTTPLTPAGEAPAQDAST 60
           +D ++NI+L  L   + L     + + +  A NP     +  ++T   PA     +   T
Sbjct: 1   MDSQRNILLIALALVSFL-----LFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPT 55

Query: 61  AIRDRALVLKETPRVAIRTPKIIGSINLKGARIDDIVLPTYKETIAKDSPAIRLYSPSGT 120
             ++ A   K    + + T  +  SI+  G  +    L  Y E +      + L +  G 
Sbjct: 56  PAQNVAAKAKT---ITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQGH 112

Query: 121 KDAYFAGF-GWQGEGIKTPDANTVWTASGTELTPTS-------PVTLSWNNGAGQNFEIR 172
           +    +G  G QG  + T +    +  S    T          P+T   N   G ++   
Sbjct: 113 QFIAQSGLVGPQGIDV-TSNNRPAYQVSADSFTLAEGQDELRIPMTYQAN---GIDYTKT 168

Query: 173 YSIDE-NYMISAAQKVSNSGTGAIAVKSYGYVSRAAPSADPDTWTIHVGPMGVFNGAA-- 229
           + +   +Y +     V+N+      +  Y ++ +    +  +        M  + G A  
Sbjct: 169 FILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNL------AMPTYRGGAYS 222

Query: 230 NYDVNYK-----DLEKGPASQSFQSTGGWIGFTDKYWLSALIPDQKDAFTGQMRKGAGTQ 284
             DV YK     D++    S     T  W+     Y+ SA IP  +D    Q+       
Sbjct: 223 TSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIP--RDEPQAQLYSRVINN 280

Query: 285 F-QTDIALAPVMLAPGKAMTQTNRLFVGAKEVKTLQAYERAGVPLFDRAIDWGWFYWFEQ 343
                I      +A G        L+VG K    LQ    A  P  D  +D+GW ++  +
Sbjct: 281 LGDMGIRTPNKTIANGDKAEFEATLWVGPK----LQDQMAATAPNLDLVVDYGWLWFIAK 336

Query: 344 PIFALLHWLFETLGNFGVAIICLTFCVRALMFPVAQRQFASMAAMRAVQPKMKALQEKYK 403
           P+  LL  +   +GN+GVAIICLTF VR  M+P+ + Q+ SMA MR +QPK++A++E+  
Sbjct: 337 PLHWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIG 396

Query: 404 DDKQQLQQKMMELYKQEKVNPLAGCLPIFIQIPIFFALYKVLQLTIEMRHQPFVLWIKDL 463
           DD+Q++ Q+MMELYK+EKVNPL GCLPI +Q+PIF ALY  L  ++E+RH PF  WI DL
Sbjct: 397 DDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDL 456

Query: 464 SAPDPLHILNLFGLLPFTPPSFLAIGVLALLLGISMWLQFKLNPAQM-DPMQQQVFAIMP 522
           SA DP +I                   L LL+G SM++  K++P  + DPMQQ++   MP
Sbjct: 457 SAQDPYYI-------------------LPLLMGASMFVIQKMSPTTITDPMQQKIMTFMP 497

Query: 523 WMMMFIMAPFAAGLLVYWITNNCLSMAQQWWLYK 556
            M  F    F +GL++YW+ +N +++ QQ  +YK
Sbjct: 498 VMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531