Pairwise Alignments

Query, 426 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Sphingobium sp. HT1-2

Subject, 471 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas syringae pv. syringae B728a

 Score =  178 bits (451), Expect = 4e-49
 Identities = 129/371 (34%), Positives = 191/371 (51%), Gaps = 27/371 (7%)

Query: 60  SAFLLDGPRRIALDVAGAQAGAS-GYAGSNAVVSGIRQGQLSDTMARIVLDLTTPATLGD 118
           S F L  P R+ +D+ GA  G       +N  +S +R  Q + T  R+V+DL    T   
Sbjct: 52  SLFTLTSPDRLVIDINGATLGGPLNVPTANTPISSMRSAQRTPTDLRVVIDLKKGVTPKS 111

Query: 119 PQIAAD---GKSLSFSLQNVTDGRFRTAVGQGRLRFDAPANMSARPQKRIHSITVPIPPV 175
             +A +   G  L   L +       T V        APA              VP+ P 
Sbjct: 112 FTLAPNQQYGNRLVVDLYDNAADANPTPVIPDTAANTAPA--------------VPVSPA 157

Query: 176 ARGVDL-PAIEGVRDGSRPLVVIDAGHGGHDPGAINKDNGKREKDVTLAIAQAIRDQLVK 234
              + L P   G RD    +VVIDAGHGG DPGA +   G++EK+V L+IA+ ++ Q+  
Sbjct: 158 KPEIKLTPVPNGKRD---IVVVIDAGHGGEDPGA-SGGAGQKEKNVVLSIARELQRQVNA 213

Query: 235 SGRVRVALTRDDDRFLVLQERYGIARKLGADLFISVHADSAENADAHGATVYTLSETASD 294
               R  LTR  D F+ L++R  IAR  GADLF+S+HAD+A ++ A GA+V+ LS+  + 
Sbjct: 214 EKGYRAELTRTGDYFIPLRKRTEIARSKGADLFVSIHADAAPSSAAFGASVFALSDRGAT 273

Query: 295 REAAR-LAARENKADVLNG---VNLGNQSGDVSSILIDLTQRESMNISANFARLLQREAA 350
            E AR LA  EN++D++ G   V+L ++   ++ +L+DL+   S++ S N  + +     
Sbjct: 274 SETARWLADSENRSDLIGGAGAVSLDDKDRMLAGVLLDLSMTASLSSSLNVGQKVLSNIG 333

Query: 351 PYVPFRSAYHRCASLMVLKAPDTPSVLFETGYISNADDALFLSSHEGQQAIARGVARAID 410
                  A    A  MVLK+PD PS+L ETG+ISNA++A  L S   QQA+AR +   + 
Sbjct: 334 RVTSLHKARVEQAGFMVLKSPDIPSILVETGFISNANEANKLGSASHQQALARSITSGVK 393

Query: 411 VHFARKLAMGS 421
             F +    G+
Sbjct: 394 QFFQQNPPQGT 404