Pairwise Alignments

Query, 734 a.a., Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) from Sphingobium sp. HT1-2

Subject, 688 a.a., glycyl-tRNA synthetase, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  378 bits (970), Expect = e-109
 Identities = 264/740 (35%), Positives = 382/740 (51%), Gaps = 71/740 (9%)

Query: 3   DFLLELRCEEIPARMQLKASDDLARLFTEELAKAGLKPALIDSFVTPRRLALIARDLPLE 62
           + L+EL  EE+P +   K ++     FTEEL KA L       +  PRRLAL   +L + 
Sbjct: 5   NLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAVWYAAPRRLALNITELAIA 64

Query: 63  TAAVSEEFKGPRTSA-------PAQALEGFLRKTGLTQDQLE---DRDGVWFAVVNK-PG 111
            A    E +GP  S+       P +A EG+ R  G+T DQ E      G W     K  G
Sbjct: 65  QADKIVEKRGPAVSSAFDAGGKPTKAAEGWARGNGITVDQAERLVTDKGEWLVYNAKVEG 124

Query: 112 RATTDVLAEAVPAVIRAFPWPKSMRWGAASATTESLRWVRPLQGIIALLGGEIVPLSVEG 171
             T  ++A      +   P PK MRWG++       +++RP+     LLG E++   + G
Sbjct: 125 VETKSLVAAMAQRALDKLPIPKPMRWGSSKT-----QFIRPVHTATMLLGSELIEGELLG 179

Query: 172 IEAGRETVGHRFHSTGAIRIDGADDYADKLRA-AYVIVSHQERQAIIEAKAGEAAAAKGY 230
           I++ R   GHRF  TG   +D AD+Y   L+    VI  ++ R+A+I+A A +AAA  G 
Sbjct: 180 IKSARNIRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEKAAAKIGG 238

Query: 231 SVIEDKGLVAENAGLTEWPVPLLGDFDPEFLEVPPEVIQLTLRINQKYFVLRDAAGKLAP 290
           +   +  L+ E   L EWPV L   F+ +FL VP E +  T++ +QKYF + D AGKL P
Sbjct: 239 TADIEDALLEEVTSLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFDDAGKLLP 298

Query: 291 AFICTANIEAKDGGVAIVAGNRKVLAARLSDARFFWQQDRKTPLAEQAQKLGRITFHEKL 350
            FI  ANIE+KD    I++GN KV+  RL+DA FF+  D+K  L  +   L  + F ++L
Sbjct: 299 NFIFVANIESKDPA-QIISGNEKVVRPRLADAEFFFNTDKKHTLESRLPSLETVLFQQQL 357

Query: 351 GTVADKVERVAKLAEWLASEGIVPNCDPVLARQAAELCKADLVTEMVGEFPELQGVMGGY 410
           GT+ DKV R++ LA ++A +      + V A +A  L K DL+T MV EF + QG MG +
Sbjct: 358 GTLKDKVTRISALAAFIAEQ---TGANAVDAARAGLLSKTDLMTNMVMEFTDTQGTMGMH 414

Query: 411 YARAEGLPDAVADAIRDHYKPVGQGDDVPTAPVTVAVSLADKLDSLAGFFLIGETPTGSR 470
           YAR +G  +AVA A+ + YKP   GD VPTA V+ AV+LADKLD+L G F IG+ P G+ 
Sbjct: 415 YARLDGETEAVALAMEEQYKPKFSGDTVPTAAVSCAVALADKLDTLVGIFGIGQAPKGAA 474

Query: 471 DPFALRRSALGLISLVQEAGLRLGLEKLISRQILWLDESRVRSLINDVSSLVDGAIDLFD 530
           DPFALRR+A+G++ ++ E  L L L  LI++                 +  + GA     
Sbjct: 475 DPFALRRAAIGVLRIIVENKLPLDLVTLIAK-----------------AQELHGA----- 512

Query: 531 GDVPDEFIDSAYEKSKSSRDDKLQKMIDNAIQARTKLLDFFADRLKVQQKEAGVRHDLID 590
                                     + NA  A  ++L+F   R +   ++ G+  D+I 
Sbjct: 513 -------------------------NLSNA-NASEEVLEFLMARFRAWYQDKGINVDVIL 546

Query: 591 AVFALGGEDDLVRLLARVKALQSFVATDDGANLLAGYKRAANILKKEGVEQAEAISLSYE 650
           AV A           +R+ A+  F   +  + L A  KR +NIL K   E   +++++  
Sbjct: 547 AVLARRPTRP-ADFDSRINAVSHFRGLEASSALAAANKRVSNILAKVEGELPSSVNVALL 605

Query: 651 PEKAEADLIAALDAAEPQAAQAVAAEEFEGAMAALATLRAPIDAFFETVTVNDADPAKRT 710
            E AE  L A L   +PQ A   A  +++ A+  LA+LR  +D FFE V V   D A R 
Sbjct: 606 SEAAEQALAAKLAELQPQLAPLFANADYQQALTLLASLRESVDQFFEDVMVMADDAALRN 665

Query: 711 TRLALLARVRDAVHNVADFS 730
            RLALL  +R+   +VAD S
Sbjct: 666 NRLALLNNLREQFLHVADIS 685