Pairwise Alignments

Query, 432 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 422 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (326), Expect = 1e-34
 Identities = 112/406 (27%), Positives = 192/406 (47%), Gaps = 37/406 (9%)

Query: 34  EGLHLRLE-GGAKVWALRL--KIGERRRDIGLGRYNGKIGLTLEQSVREEGLSLAEARDK 90
           +GL LR++  G+K W          +R ++  G Y                +SL +AR  
Sbjct: 29  DGLRLRIKPNGSKQWIFNYYRPTNGKRANLSFGMY--------------PDISLLQARKS 74

Query: 91  AREIRAKVRSGVDPIEEKRVQKQAAHIGTAKSKTFKECAELCISDKSGEWKNGKHVKQWS 150
               +  +  G+DP ++++ Q+Q          TF+   +   + K  +      +  W 
Sbjct: 75  LLSAKELIAQGIDPQDDRKRQQQVHK--EIHEHTFENVTKDWFAIKQNDVTPDYALDIWR 132

Query: 151 ATLETYAYPKLGKLPVSSVDRGLILDVLRPIWATKG--ETASRLRGRIETVLNWAKVNGY 208
           + LE + +P +   PV ++    I+++L+PI A KG  ET  RL  R+  V+N+A   G 
Sbjct: 133 S-LELHIFPHISDKPVKAITAPEIIELLKPIEA-KGSLETVKRLTQRLNEVMNFATNCGL 190

Query: 209 RDGENPAAWKGNLEHSLSKRQKLTRGHHASLPYAELGSFMADLRKRD--GISARALEFAI 266
               NP      ++ +  K +K    + A+L  AEL   M+ +        +   LE+ +
Sbjct: 191 IQA-NPLT---GIKAAFKKPKK---ENMAALTPAELPELMSAIANASIKRTTRCLLEWQL 243

Query: 267 LTVARSGEVRKATWAEIDLDRKMWVIPAERMKAGKEHRVPLSDAVVALLKALPRVAG-SD 325
            T+ R  E   A W EI+ + K+W IPAERMK  +EHR+PL++ ++ALL+ +  ++G  D
Sbjct: 244 HTMTRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISGHRD 303

Query: 326 YVFPAPRGGAMSDMALTA--VLKRMDRAG-LTQHGFRSTFREWAGEVTAYPREVIEHALA 382
           ++FP+ R       + TA   LKRM  AG L  HG RS       E   +  +++E ALA
Sbjct: 304 FIFPSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNE-QGFDPDLVESALA 362

Query: 383 HSLADKAEAAYQRGSLLPKRVKLMADWATYAGTVQQSAGNVVAIRE 428
           H   ++  +AY R   L +R  +M  W+ +     + + +V   ++
Sbjct: 363 HVDDNQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGSLSVTGTKQ 408