Pairwise Alignments

Query, 432 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

 Score =  121 bits (304), Expect = 4e-32
 Identities = 116/390 (29%), Positives = 183/390 (46%), Gaps = 37/390 (9%)

Query: 34  EGLHLRLE-GGAKVWALRLK--IGERRRDIGLGRYNGKIGLTLEQSVREEGLSLAEARDK 90
           +GL LR++  G K+W L+    I ++R +I  G +                +SLAEAR +
Sbjct: 29  DGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCF--------------PDVSLAEARKR 74

Query: 91  AREIRAKVRSGVDPIEEKRVQ--KQAAHIGTAKSKTFKECAELCISDKSGEWKNGKHVKQ 148
             E +  +   +DP + K  Q  K+ A +      TF + ++  ++ K    K     K 
Sbjct: 75  RSEAKTLLALNIDPKQHKDEQLLKERAEL----ENTFGKYSDRWLTLKRESVKPETADKA 130

Query: 149 WSATLETYAYPKLGKLPVSSVDRGLILDVLRPIWATKG-ETASRLRGRIETVLNWAKVNG 207
           + A LE +  PKLG +P+  +    +L +L P+ A    ET  RL   I  V+  A  +G
Sbjct: 131 YRA-LEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAVASG 189

Query: 208 YRDGENPAAWKGNLEHSLSKRQKLTRGHHASLPYAELGSFMADLRKRDGISARAL-EFAI 266
             D E              KRQ +       LP  EL   +A+      ++ R L E+ +
Sbjct: 190 --DIEVNYLADITKLFPAPKRQHMVTIEPERLP--ELMQAIANANIT--LATRCLLEWQL 243

Query: 267 LTVARSGEVRKATWAEIDLDRKMWVIPAERMKAGKEHRVPLSDAVVALLKAL-PRVAGSD 325
            T+ R  E   A W +ID   K+WVIPAERMK  + H +PL++  +ALL+ + P  +  +
Sbjct: 244 HTMTRPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPISSHRE 303

Query: 326 YVFPAPRG--GAMSDMALTAVLKRMDRAG-LTQHGFRSTFREWAGEVTAYPREVIEHALA 382
           Y+FP+ +     ++  +    LKRM   G L  HG R+       E    P ++IE ALA
Sbjct: 304 YIFPSNKNPKSHVNSQSANMALKRMGYKGQLVSHGLRALASTTLNEQGFNP-DIIEAALA 362

Query: 383 HSLADKAEAAYQRGSLLPKRVKLMADWATY 412
           H   ++   AY R   L +R KLM+ W+++
Sbjct: 363 HVDKNEVRKAYNRAEYLEQRRKLMSWWSSH 392