Pairwise Alignments

Query, 228 a.a., Transcriptional regulator, GntR family from Sphingobium sp. HT1-2

Subject, 238 a.a., transcriptional regulator. GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 73.2 bits (178), Expect = 4e-18
 Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 6/204 (2%)

Query: 13  TLVREHALDKLRSAIATGLYQPGTRLVERELCEALGVSRTSVREALRQLQSESLIEAGPR 72
           T + +  L +++++I  G    G+++ E+ L E  G+SR   REAL+ L+ + L+   P 
Sbjct: 14  TTLADQILVQIQTSIIKGELPAGSKINEQALAEKYGISRGPTREALQTLERQRLVVRAPH 73

Query: 73  RTIIVSVLNAQDAFDIYSLREMVETTAIRRLVERDDSKAAKRLQSAFKAIEKCAHKGDLP 132
               V+ L   +  D+Y LR ++E  A      R   +   +L+      E     GD  
Sbjct: 74  VGARVAQLTVSELNDLYQLRSVLEGMACELAASRITPEQLAKLEDLLAVQETALANGDTY 133

Query: 133 ALSAMAGTFYEEILDGSGSKVVRDT---GRQLLKRVSYLRLASMSEPQRMENGLAEWSQI 189
                   F+ +I+  SG+K +++T   G   L R+   +  + + P +    +AE  +I
Sbjct: 134 FQEEGDVDFHYQIIQASGNKHLQETLIGGLYHLLRMYRYQCTNKNRPVK---AIAEHRRI 190

Query: 190 MDAVMERDADKAVEALGRHIRNSR 213
           ++A+ +RD + A   + RHI   R
Sbjct: 191 VEAIAQRDGELASLLMRRHIEQGR 214