Pairwise Alignments

Query, 407 a.a., Mobile element protein from Sphingobium sp. HT1-2

Subject, 401 a.a., ISSod5, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  321 bits (822), Expect = 3e-92
 Identities = 159/391 (40%), Positives = 242/391 (61%), Gaps = 6/391 (1%)

Query: 11  NDILDQLLAGTDAAAALSQGGLLDTLRKAFAERALNAEMDHHLGQEEQGTNSRNGYGRKT 70
           N  +  L  G D      + G+L  L K   E AL AE+D HL   E G N +NG   KT
Sbjct: 9   NAAIQALREGKDLTG---KDGILTPLIKQLTEAALAAELDGHLASTE-GANRKNGKTTKT 64

Query: 71  VTTDGGRIEIEVPRDRAGSFDPQLIAKYQRRFPG-FDDKIISMYARGMSTREITGHLREL 129
           V +  G  E+  PRDRAG+F+PQL+ K+Q +     + KII +++ G S ++I  H+ ++
Sbjct: 65  VKSPLGNFELNTPRDRAGTFEPQLVKKHQTQLTDEMERKIIGLFSLGSSYQDIRAHIEDM 124

Query: 130 YGIEASPDLISTITDAVLEEVTAWQQRPLDPAYPLVFFDAIRVKIRDEGMVRNKAIHIAL 189
           YG+  S   ++ ITD +L E+ AW++R L+P YP+++ DAI  KI++ G   +KA++  L
Sbjct: 125 YGMSVSNGTVNAITDKLLPELQAWRERELEPPYPVIWLDAIHYKIKENGRFISKAVYTIL 184

Query: 190 GVMADGTKVVLGLWLEQNEGAKFWLRVMNELRNRGVEDIMLAVVDGLKGFPDAITAVFPE 249
            +  +G K +LGL+L  NEGA  WL V+ +L NRGV+DI++A VDGLKGFP+AI  ++P+
Sbjct: 185 ALNVEGKKELLGLYLSDNEGAHHWLSVLTDLYNRGVKDILIACVDGLKGFPEAIETIYPQ 244

Query: 250 AMVQTCIVHLLRNSMDFVAWKDRKALGTALKAIYRAVDAAAAEEALTAFEASFWGQRYPA 309
             VQ C++H +RNSM +VA K +KA    LK +Y+A    AAE AL   E   WG +YP 
Sbjct: 245 TEVQLCVIHQIRNSMKYVASKHQKAFMADLKCVYKAATLNAAEMALDELETK-WGDKYPV 303

Query: 310 IGQSWRRAWSEVIPFFAFPDEVRRIVYTTNAIEALNSKLRRAVRARGHFPNDEAATKLLY 369
           + +SWR  W+ +  +F +PD VR  +YTTNA+EA++ + R+  + +G F N+ +  KLLY
Sbjct: 304 VIKSWRNKWALLSVYFKYPDYVRTAIYTTNAVEAVHRQFRKLTKTKGGFANENSLLKLLY 363

Query: 370 LILNRSEKEWKMPPREWNMAKAQFAVLFGER 400
             + ++ + W  P + WN+  +Q ++ F  R
Sbjct: 364 AGILKASERWTHPIQNWNLTLSQLSIHFEGR 394