Pairwise Alignments

Query, 276 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase (EC 2.1.1.266) from Sphingobium sp. HT1-2

Subject, 279 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Vibrio cholerae E7946 ATCC 55056

 Score =  169 bits (428), Expect = 6e-47
 Identities = 92/269 (34%), Positives = 143/269 (53%), Gaps = 4/269 (1%)

Query: 1   MNYRHSFHAGNSADVVKHSLLIALIRALQHKPGALTLIDTHAGCGLYDLGGDAAQRTGEA 60
           ++YRHSFHAGN ADV+KH +   ++ +LQ K       DTH+G G YDL  + +++TGE 
Sbjct: 2   LSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGEY 61

Query: 61  TQGVLRAFADKN--PLLDDYRAAVRAVNVGDEPQLYPGSPRFLAQLLRPQDILILNEKHP 118
            QG+ R +   N    LD Y  A+R +N G+  + YPGSPR     LR QD ++L E HP
Sbjct: 62  KQGIARIWQQDNIPAELDSYLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELHP 121

Query: 119 EDAYTLRGAM-RGTSAAVHERDAYELWLAMVPPRTARGVVVVDPPYEQTDERARITATLA 177
            D   L     R    ++++ D +    A +PP+  RG+V++DPPYE   E   +   +A
Sbjct: 122 SDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRDVVRAIA 181

Query: 178 AAQRKWAHGVTVIWFPLKDYATHARWKAQLRKLSIPKFLCVEHWLYDSEQPGIYNGAGLF 237
            + ++WA G+  IW+P+ +          L+ L I K L +E  +           +G+ 
Sbjct: 182 QSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTASGMI 241

Query: 238 IVNPPYAFTQALPPMLEAFRAALAP-EGH 265
           ++NPP+     +  +L   + A+AP  GH
Sbjct: 242 VINPPWTLESQMQTILPFLKQAIAPATGH 270