Pairwise Alignments

Query, 276 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase (EC 2.1.1.266) from Sphingobium sp. HT1-2

Subject, 281 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  145 bits (365), Expect = 1e-39
 Identities = 93/272 (34%), Positives = 145/272 (53%), Gaps = 8/272 (2%)

Query: 1   MNYRHSFHAGNSADVVKHSLLIALIRALQHKPGALTLIDTHAGCGLYDLGGDAAQRTGEA 60
           ++YRH +HAGN ADV+KH++L+  ++ +  K   L  IDTHAG G Y L  + AQ+TGE 
Sbjct: 2   LSYRHGYHAGNYADVLKHAMLLQTLQLMHKKDKPLVYIDTHAGAGGYALTDEFAQKTGEY 61

Query: 61  TQGVLRAF--ADKNPLLDDYRAAVRAVNVGDEPQL--YPGSPRFLAQLLRPQDILILNEK 116
             GV + +   D    L DY  AVR  N  +  +L  YPGSP F+   L P+D ++L+E 
Sbjct: 62  LDGVAKLWNKTDLPKSLQDYVDAVRHFNEDNPEELNFYPGSPAFIDMDLGPKDRMVLHEL 121

Query: 117 HPEDAYTLRGAM-RGTSAAVHERDAYELWLAMVPPRTARGVVVVDPPYEQTDERARITAT 175
           H  D   L     +     V + D  +  +A VPP   R +V+VDP YE   +   +  T
Sbjct: 122 HGTDHLLLDEYFEQDKQVKVIKGDGLKGLIAAVPPLERRALVLVDPSYEIKTDYQTVADT 181

Query: 176 LAAAQRKWAHGVTVIWFPLKDYATHARWKAQLRKLSIPKFLCVEHWLY-DSEQPGIYNGA 234
           L  A +++A GV ++W+P+ + A      ++L    I + L +E  +  DS + G+   A
Sbjct: 182 LIKAHKRFATGVFMLWYPVVNRAQTEEMLSRLANSGIKRQLRIEQAIKPDSNEFGM-TAA 240

Query: 235 GLFIVNPPYAFTQALPPMLEAFRAALA-PEGH 265
           GL+++NPP+   +    M++     L   +GH
Sbjct: 241 GLWVINPPWQLDEIANEMVDYLGKTLGQADGH 272