Pairwise Alignments

Query, 464 a.a., Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) from Sphingobium sp. HT1-2

Subject, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

 Score =  239 bits (611), Expect = 1e-67
 Identities = 156/509 (30%), Positives = 243/509 (47%), Gaps = 73/509 (14%)

Query: 1   MDAIILARAQFAFTVSFHFLFPAFSIGLASYLAVLEALWLKTGKGVYANLFRYWLKIFAV 60
           +D + L+R QFA T  FHFLF   +IG++  LA++E++++ TGK +Y ++ R+W K+F +
Sbjct: 6   IDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFGI 65

Query: 61  VFAMGVVSGIVMSYQFGTNWSVFSDKAGPVIGPLMAYEVLTAFFLEAGFLGVMLFGINKV 120
            FA+GV +G+ M +QFGTNWS +S   G + G  +A E L AFFLE+ F+G+  FG +++
Sbjct: 66  NFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSRL 125

Query: 121 GRKLHFVATLAVALGTFISAFWILSVNSWMQTPVGYEVGANGQFLPGPSWLTIIFNPSFP 180
            ++ H + T  VALG+  SA WIL  N WMQ PVG E       +   S+  ++ NP   
Sbjct: 126 SKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVAQ 185

Query: 181 YRLFHTVLAAYLTTAFIVGAVGGWHLLKDRTNPGARKMFSMA--MWMAALVAPIQIFAGD 238
            +  HTV +AY   A  +  V  ++LL+ R    AR+ F++A    MAA+++ I +  GD
Sbjct: 186 VKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVL--GD 243

Query: 239 MHGLNTLKHQPVKVMAMEGHFQSHPHGAPLILFGIPNSAEQRVDYVVEIPKASSLILKHQ 298
             G      Q VK+ A+E  + + P  A   LFG+PN  E + DY ++IP    LI    
Sbjct: 244 ESGYKLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRS 303

Query: 299 LDAPLKGLDTVPQAD--RPPVGIVFWAFRVMVGIGFAM-------------LGIGLLSLI 343
            D  + GL  +      R   G+V +     +  G A              LG GL  L+
Sbjct: 304 FDEQVTGLHDLRHEHLLRIRNGMVAYQLLERLQAGDASVETQRKFEQTKHDLGYGL--LL 361

Query: 344 ARWRKALYD-----------------WSLLHRFAVLMG---------------------- 364
            R+   + D                 W L   F +++G                      
Sbjct: 362 KRYTDTITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRIT 421

Query: 365 -------------PSGLIAVLAGWIVTEVGRQPFTIYGLLRTTQSASPLDAPAVASSLLA 411
                        P   IA+ AGW V E GRQP+ I  +L  T + S      + +SL  
Sbjct: 422 HKPWVLKAALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLAI 481

Query: 412 FVIVYFTVFGMGIWYLLHLMKKPPEAHET 440
            + +Y     +  + ++ + +K P + +T
Sbjct: 482 ILSLYTVFIFVESYLIVTVARKGPSSLKT 510