Pairwise Alignments

Query, 464 a.a., Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) from Sphingobium sp. HT1-2

Subject, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

 Score =  242 bits (617), Expect = 3e-68
 Identities = 153/507 (30%), Positives = 238/507 (46%), Gaps = 69/507 (13%)

Query: 1   MDAIILARAQFAFTVSFHFLFPAFSIGLASYLAVLEALWLKTGKGVYANLFRYWLKIFAV 60
           +D + L+R QFA T  +HFLF   ++G+A  LA++E+L++ T K +Y ++ ++W K+F +
Sbjct: 15  IDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGI 74

Query: 61  VFAMGVVSGIVMSYQFGTNWSVFSDKAGPVIGPLMAYEVLTAFFLEAGFLGVMLFGINKV 120
            FA+GV +G+ M +QFGTNWS +S   G + G  +A E L AFFLE+ F+G+  FG +++
Sbjct: 75  NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRL 134

Query: 121 GRKLHFVATLAVALGTFISAFWILSVNSWMQTPVGYEVGANGQFLPGPSWLTIIFNPSFP 180
            ++ H V T  VALG+  SA WIL  N WMQ PVG E       +   S+  ++ NP   
Sbjct: 135 SKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQ 194

Query: 181 YRLFHTVLAAYLTTAFIVGAVGGWHLLKDRTNPGARKMFSMAMWMAALVAPIQIFAGDMH 240
            +  HTV A Y T A  +  +  ++LLK R    AR+ F++A           I  GD  
Sbjct: 195 VKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDES 254

Query: 241 GLNTLKHQPVKVMAMEGHFQSHPHGAPLILFGIPNSAEQRVDYVVEIPKASSLILKHQLD 300
           G    + Q VK+ A+E  + + P  A   LFGIPN  E R DY ++IP A  +I    LD
Sbjct: 255 GYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSLD 314

Query: 301 APLKGLDTV--PQADRPPVGIVFWAFRVMVGIGFAM-------------LGIGLLSLIAR 345
             + GL  +     +R   GI  +     +  G                LG GL  L+ R
Sbjct: 315 EQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGL--LLKR 372

Query: 346 WRKALYD-----------------WSLLHRFAVLMGPSGLIAVLAG-------------- 374
           +   + D                 W L   F +++    ++ V+ G              
Sbjct: 373 YTDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQK 432

Query: 375 ---------------------WIVTEVGRQPFTIYGLLRTTQSASPLDAPAVASSLLAFV 413
                                W V E GRQP+ +  +L    +AS L A  + +S+LA +
Sbjct: 433 KWVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAIL 492

Query: 414 IVYFTVFGMGIWYLLHLMKKPPEAHET 440
            +Y       ++ ++   +K P + +T
Sbjct: 493 ALYTIFLIAEVYLMVKFTRKGPSSLKT 519