Pairwise Alignments

Query, 464 a.a., Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) from Sphingobium sp. HT1-2

Subject, 479 a.a., cytochrome bd quinol oxidase subunit 1 apoprotein from Pseudomonas syringae pv. syringae B728a

 Score =  523 bits (1346), Expect = e-153
 Identities = 264/464 (56%), Positives = 326/464 (70%), Gaps = 5/464 (1%)

Query: 1   MDAIILARAQFAFTVSFHFLFPAFSIGLASYLAVLEALWLKTGKGVYANLFRYWLKIFAV 60
           ++AI LAR QFAFT+SFH LFPA +IGLASYLAVLE LWLKT   VY +L+ +W KIFAV
Sbjct: 4   LEAIDLARIQFAFTISFHILFPAITIGLASYLAVLEGLWLKTRDDVYRDLYHFWSKIFAV 63

Query: 61  VFAMGVVSGIVMSYQFGTNWSVFSDKAGPVIGPLMAYEVLTAFFLEAGFLGVMLFGINKV 120
            F MGVVSG+VM+YQFGTNWS FSD AG V GPL+ YEVLTAFFLEAGFLGVMLFG N+V
Sbjct: 64  NFGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGWNRV 123

Query: 121 GRKLHFVATLAVALGTFISAFWILSVNSWMQTPVGYEVGANGQFLPGPSWLTIIFNPSFP 180
           GR LHF +T+ VA+GT IS FWILS NSWMQTP G+E+  +G+ +P   W  ++FNPSFP
Sbjct: 124 GRNLHFFSTVMVAIGTLISTFWILSSNSWMQTPQGFEI-IDGRVIP-TDWFAVVFNPSFP 181

Query: 181 YRLFHTVLAAYLTTAFIVGAVGGWHLLKDRTNPGARKMFSMAMWMAALVAPIQIFAGDMH 240
           YRL H  +AA++ TAF VG+   WHLL+ R  P  RKM SMAMWMA LVAP+Q   GD H
Sbjct: 182 YRLTHMAIAAFVATAFFVGSSAAWHLLRGRDTPAVRKMLSMAMWMALLVAPVQAVVGDFH 241

Query: 241 GLNTLKHQPVKVMAMEGHFQS-HPHGAPLILFGIPNSAEQRVDYVVEIPKASSLILKHQL 299
           GLNTLKHQP K+ A+EGH+++      PLILFGIP+  E+R  Y VEIP   SLIL H L
Sbjct: 242 GLNTLKHQPAKIAAIEGHWENVGDEPTPLILFGIPDMKEERTKYAVEIPYLGSLILTHSL 301

Query: 300 DAPLKGLDTVPQADRPPVGIVFWAFRVMVGIGFAMLGIGLLSLIARWRKALYDWSLLHRF 359
           D  +  L      DRP   IVFW+FRVMV +G  M+  GL SL  R R  LY+       
Sbjct: 302 DKQVPALKEFKPEDRPNSTIVFWSFRVMVALGMLMIFTGLWSLWLRKRGTLYNSRPFLYL 361

Query: 360 AVLMGPSGLIAVLAGWIVTEVGRQPFTIYGLLRTTQSASPLDAPAVASSLLAFVIVYFTV 419
           A+ MGPSGLIA+LAGW  TE+GRQP+ +YGL+RT  ++S      ++ +L+ FV+VYF +
Sbjct: 362 ALWMGPSGLIAILAGWFTTEIGRQPWVVYGLMRTADASSGHSVAQMSITLVLFVVVYFVL 421

Query: 420 FGMGIWYLLHLMKKPPEAH--ETPLGDAPIRSAGITPAPAIIEG 461
           FG G+ Y++ L++K P+A+    P G    +     P  A +EG
Sbjct: 422 FGTGLGYMMRLVRKGPKAYVEHVPHGGPGQQRTPARPLSAAVEG 465