Pairwise Alignments

Query, 332 a.a., Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) from Sphingobium sp. HT1-2

Subject, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

 Score =  147 bits (372), Expect = 3e-40
 Identities = 109/360 (30%), Positives = 181/360 (50%), Gaps = 38/360 (10%)

Query: 4   LTVIWACIIGFAIIAYVVMDGFDLGIGILFPFFKVGQ-DRDTAMNSIAPVWDGNETWLVM 62
           L +IW  +IG  +I +++ DGFD+G+G L P     + D+   +NSIAP WDGN+ WL+ 
Sbjct: 7   LRLIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGNQVWLIT 66

Query: 63  GVGGLFAAFPLAYAIILPALYAPMIAMLLGLVFRGVAFEFRWR--DPAHRAFWDKAFTTG 120
             G LFAA+PL YA    +LY  M  +LL L  R +A E+R +   P+ R   D + +  
Sbjct: 67  AGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICDISISLS 126

Query: 121 SVVATFAQGIALGALLQGITVEGRS-----YAGGWWEWLSPFSLLTG-VGLLVGYALLGA 174
            ++     G+A G L+QG+     +     Y G + + ++PFS+L+G +G+L+   + G+
Sbjct: 127 GLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMAL-VQGS 185

Query: 175 CWLNWKTEGGLRRQ---TVTYAGRLGIGLLI--------MIGVISLATLR-------LET 216
            WL  KT   L ++   T   +     GL I        M G + +++L        L  
Sbjct: 186 AWLTLKTSDILHKKARLTAQISVLCLFGLFIIGGFMVHGMNGYLIVSSLDYNAISNPLNK 245

Query: 217 QYFQR---WLS-FPGVVATAQVPLATLVVTFLFYRSLRLKRDAQPFFWALALFGLCLVGL 272
             FQ+   WL+ F         P+  L++    + S + K DA  F  A       ++  
Sbjct: 246 VVFQQAGAWLTNFERYPWMWFAPMGGLMMAMGVFLSAKWKNDAITFVCASVTNACIILTA 305

Query: 273 GVSIWPDVVPAR------VTIWEAAAPVRSQLFMLVGASIMVPVILAYTAWSYWVFRGKV 326
           G +++P ++P+       +T+W+A +  R+   M   A +M+P+IL YTA+SY    G++
Sbjct: 306 GFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSYRTMFGRL 365