Pairwise Alignments

Query, 210 a.a., Phage integrase from Sphingobium sp. HT1-2

Subject, 298 a.a., site-specific tyrosine recombinase XerD from Klebsiella michiganensis M5al

 Score = 45.1 bits (105), Expect = 1e-09
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 21/170 (12%)

Query: 40  LNQRRRLRDRALFDLAIDSKLRGCDLVQIKIGDLVSGGQVRTRAIVMQQKTGRPVQFELL 99
           + Q   LRD+A+ ++   + LR  +LV + + D +S  Q   R I      G+  +  L+
Sbjct: 127 VEQPLELRDKAMLEVLYATGLRVSELVGLTMSD-ISLRQGVLRVI------GKGNKERLV 179

Query: 100 PDARASLLAWLERR---------GGTVDDYVFPSRVDHNGHLSTRQ-YARLVDEWVTGVG 149
           P    ++L W+E            G   D +FPS+        TRQ +   +  +    G
Sbjct: 180 PLGEEAVL-WVENYLEYGRPWLLNGVASDVLFPSQ---RAQQMTRQTFWHRIKHYAVLAG 235

Query: 150 LMRSEYGTHSLRRTKASIIYRATGNLRAVQILLGHSKIENTVRYLGIDVE 199
           +   +   H LR   A+ +     +LR VQ+LLGHS +  T  Y  +  E
Sbjct: 236 IDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATE 285