Pairwise Alignments

Query, 188 a.a., sigma-24 (FecI-like) protein from Sphingobium sp. HT1-2

Subject, 190 a.a., RNA polymerase sigma factor RpoE from Vibrio cholerae E7946 ATCC 55056

 Score = 66.6 bits (161), Expect = 3e-16
 Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 4/182 (2%)

Query: 9   SDGELAALALGGRQAAYGELVRRHQGWVHRLVRSHVGSMDEALDVTQASFVAAFAALNRY 68
           +D  L      G + A+  LV R+Q  V  L+  +V +  +  DV Q +F+ A+ A+  +
Sbjct: 6   TDQVLIERVQNGDKQAFNLLVLRYQNKVCNLISRYVSNSGDVADVAQEAFIKAYRAIPTF 65

Query: 69  DVTRPFQVWMSRIVINKCHDW----RRRRAVRNFFALALPLGEADGVADDAPLPDQAIGA 124
                F  W+ RI +N   +      RR    +  A      E      +   P+    +
Sbjct: 66  RGESAFYTWLYRIAVNTAKNHIVAQSRRPPASDVDAEEAEFYEGGDALKELSNPENITLS 125

Query: 125 EQQLAQAMKAIAALPSSLKDTLILRTIDEKSEAETAEILGISQKAVETRLYRARARLSEI 184
           ++       AI ALP  LK  + LR +D  S  E AE++      V +R++RAR  + + 
Sbjct: 126 KELKKTVFDAIDALPDDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRAREAVEKK 185

Query: 185 LK 186
           +K
Sbjct: 186 IK 187