Pairwise Alignments

Query, 188 a.a., sigma-24 (FecI-like) protein from Sphingobium sp. HT1-2

Subject, 227 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

 Score = 64.7 bits (156), Expect = 1e-15
 Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 17/176 (9%)

Query: 23  AAYGELVRRHQGWVHRLVRSHVGSMDEALDVTQASFVAAFAALNRYDVTRPFQVWMSRIV 82
           A +  +++ H   ++R+ RS + +  +A DV Q ++V AF     +        W++RIV
Sbjct: 20  ARFRAIMQAHNRKLYRIARSILRNDSDAEDVLQEAYVRAFTRFEDFRGDAAITTWLARIV 79

Query: 83  INKC----HDWRRRRAVRNFFA-------LALPLGEADGVADDAPLPDQAIGAEQQLAQA 131
           IN+        RR+  +  +         +A PL    G++D    P++ +   Q L   
Sbjct: 80  INEALGRLRKGRRQMRLAKYMRQSQEAEIIAFPLNS--GISD----PEKTMAQRQILDLV 133

Query: 132 MKAIAALPSSLKDTLILRTIDEKSEAETAEILGISQKAVETRLYRARARLSEILKK 187
            +    LP + +   +LR I+     E A +LG+  +   TRL+RAR  L E L++
Sbjct: 134 ERLTDDLPDTYRTVFVLRVIEGLDNEEAAALLGLKPETARTRLHRARRILKEQLER 189