Pairwise Alignments

Query, 407 a.a., Mobile element protein from Sphingobium sp. HT1-2

Subject, 400 a.a., ISSod4, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  336 bits (861), Expect = 8e-97
 Identities = 165/371 (44%), Positives = 243/371 (65%), Gaps = 5/371 (1%)

Query: 32  LLDSLKKALTERALNAEMDHHLAGEDGAGNMRNGYGRKTVMTDTGKLAIDVPRDRQSSFD 91
           +L  L K LTE AL AE++ HLA  D   N +NG   KT+   +G   +D PRDR  +F+
Sbjct: 26  ILGPLIKQLTEAALQAELEQHLA-HDPQPNRKNGKTPKTIKHPSGNFELDAPRDRNGTFE 84

Query: 92  PQLIAKYQRRFPG-FDDKIVSMYARGMSTREITRHLHDLYGIDVSPDLISTVTDAVLDEV 150
           PQLI K Q       + K++SM++ GMS R+I +H+ D+YG++VS   +S +TD ++ E+
Sbjct: 85  PQLIKKNQTTLTDEIERKVLSMFSIGMSYRDINQHVEDMYGLNVSNATVSAITDKLIPEL 144

Query: 151 ATWQQRPLDPVYPLVFFDAIRVKIRDEGMVRNKAIHIALGVRADGAKEVLGLWLEQNEGA 210
             WQQRPLD  YP+V+ DAI  K++++G   +KA++  L +   G KE+LGL L +NEGA
Sbjct: 145 KAWQQRPLDSHYPIVWLDAIHYKVKEDGRYVSKAVYTLLALNMKGKKEILGLHLSENEGA 204

Query: 211 KFWLRVMNELRNRGVEDILLAVVDGLKGFPDAITAVFPDAIVQTCIVHLLRNSMDFVSWK 270
            +WL V+ +L NRGV+DIL+A VDGL GFP+AI ++FP    Q C++H +RNSM +V+ K
Sbjct: 205 NYWLSVLTDLNNRGVKDILIACVDGLTGFPEAIASIFPHTETQLCVIHQIRNSMKYVASK 264

Query: 271 DRKNLASALKEIYRATDADAAEKALTAFEAGPWGQRYPAIGQSWRRAWGEVIPFFAFPDE 330
           ++K   + LK +YRA   +AAE AL   EA  WG  YP +  SWRR W  +  +F +P+ 
Sbjct: 265 NQKAFMADLKPVYRAVSKEAAEMALDELEA-KWGDAYPLVINSWRRKWHNLSHYFKYPEH 323

Query: 331 VRRIIYTTNAIEALNSKLRRAVRARGHFPSDEAATKLLYL-ILNRSEKEWKMPPREWTMA 389
           +R++IYTTNA+EA++ + R+  + +G FP++ +  KLLY  ILN S+K W MP   W++ 
Sbjct: 324 IRKVIYTTNAVEAVHRQFRKLTKTKGAFPNENSLLKLLYAGILNASDK-WTMPIHNWSLC 382

Query: 390 KAQFAVIFGER 400
            +Q A+ F  R
Sbjct: 383 LSQLAIYFEGR 393