Pairwise Alignments

Query, 210 a.a., Phage integrase from Sphingobium sp. HT1-2

Subject, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

 Score = 56.2 bits (134), Expect = 6e-13
 Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 12/158 (7%)

Query: 46  IRDRALFDLAIDSKLCGCDLVKIRISDI-VCDRKIRTRATVVQQKTGRPVQFELMDDARA 104
           IRDRA+ +L   + L   +LV I I D+ + + +IR    + +    R V F     A+ 
Sbjct: 142 IRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIRV---IGKGNKERKVWFA--GQAQE 196

Query: 105 SLLKWLELR---CGSSEDFAFPSRTDHATHISTRQYARLVDEWVTGIGLPSEDYGTHSLR 161
            + KWL+LR     S+E   F S+    T IS R   + + EW     + S     H LR
Sbjct: 197 WVGKWLKLRSQLADSAETALFVSKL--GTRISHRSVQKRMAEWGQKQAVASH-ISPHKLR 253

Query: 162 RTKASIIYKATGNLRAVQILLGHTKIESTVRYLGVDVE 199
            + A+ + +++ NLRAVQ LLGH  I +T  Y  +D +
Sbjct: 254 HSFATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQ 291