Pairwise Alignments

Query, 434 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  135 bits (339), Expect = 4e-36
 Identities = 103/334 (30%), Positives = 162/334 (48%), Gaps = 22/334 (6%)

Query: 119 LIGSAALFILLLCGATGWLLWRGIVAPIATLIDGTDRLRAERAPARVRLQGLHELQHLAA 178
           +I S A+F ++     G  L R +  P+A L+  T  L   R   R+ + G  EL+ LA 
Sbjct: 206 VITSLAVFGMVSGALLGVWLLRTLSKPLAELVKSTTALEQGRLDHRISISGPDELKTLAR 265

Query: 179 QFNDMAEA--------------IETQVATRTTALEQANQRLRDIDGRRRLFLSKVSHELR 224
            FN MA++              IE +VA RT  L QA Q L     +++ F + VSHELR
Sbjct: 266 HFNYMAQSLEQAQQKERMSRQLIEREVADRTQELAQALQTLEKAKHQQKEFFANVSHELR 325

Query: 225 TPVTVMRGEAEVALR-RPEDRAALEDALVHIVDSGQFLHRRLDDLLALAQADDGALSVAP 283
           +P T + GEA++ LR R          L+ I +S + L  R++DLL L + D+     A 
Sbjct: 326 SPATAILGEAQITLRSRHNSDDEYRQTLLRISESAEQLAFRIEDLLMLIRHDERLFHPAL 385

Query: 284 RPIDLA----AVLREAHAMVAPFARSSGIGLQLEAASDAVPIVGDPDRLRQALVAIIDNG 339
             + L     AV+R+A  +         +    +          D D+L   +  ++DN 
Sbjct: 386 TELLLGEIWQAVVRQASLLTHAQQVELTVNTPAQGEWQTQLCYTDCDKLLMVIRILVDNA 445

Query: 340 IKFSPPEGMIRLDLRSDGDRARIAISDDGPGLAEADLARIFDPYFQADVGR--SRGGTGL 397
           +++ P +  I L+L  D +  R+ + D G G+AEADL+ IF+ YF+A+ G+     G G+
Sbjct: 446 LRYDPTQQPIGLNLELDEEAWRVQLVDQGIGIAEADLSVIFERYFRAENGKRYRPDGLGI 505

Query: 398 GLALARWIADRHGGHLDAANHRMREGLCVSLTLP 431
           GL LA+ I  +  G +      + +G  V+LT P
Sbjct: 506 GLTLAQSIVKQLDGEI-RIESVLEQGTTVTLTFP 538