Pairwise Alignments

Query, 387 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Sphingobium sp. HT1-2

Subject, 316 a.a., D-alanyl-D-alanine endopeptidase from Vibrio cholerae E7946 ATCC 55056

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 22/274 (8%)

Query: 32  AYLKDLSSGAVLYDKGGETRMPPASMAKMMTAHVAFRLIQKGELKLDTKFTVRPETWQQW 91
           A + DL +  ++Y    +   P AS+ K+MTA V        +L +D K  +  +  ++ 
Sbjct: 50  ALVIDLKTNEIIYSNNPDAVKPIASVTKLMTAIVTL----DAKLPMDAKLPITIKDAKEM 105

Query: 92  HGPKAGSTMFLSVGEQVSVENLLHGIVTLSGNDACVVLAEGIAGTEQAFVALMNEEAKRM 151
            G  +     + +G ++S +++L   +  S N A   LA    G  +AF+  MN +AK +
Sbjct: 106 KGVHSR----VKIGSEISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMNAKAKAL 161

Query: 152 GLKNSHFGTSNGWPDEGVTYVTAEDLAKLAEATIVETPDLYKKFYAT--RSFTWGKTMGG 209
           G+KN+ F    G   + V+  TA DL  L +A+  +   L  K  AT  ++ T+ K    
Sbjct: 162 GMKNTRFVEPTGLSAKNVS--TARDLVVLLKAS--KKYPLLGKLSATDKKTVTFSKPRYT 217

Query: 210 SDIAQANRNPILGKIAGADGLKTGHTEEAGFGFTGSAEQDGRRLVMVVAGLTSFNGRITE 269
            D    NR  +       D  KTG T  AG       +   R++  VV         + +
Sbjct: 218 LDFRNTNR-LVHNDNWKIDLTKTGFTNAAGHCLVMRTQMGRRQVAFVVLDTKGKLSPVGD 276

Query: 270 SVRFMDWGFRAWKAQPL------FKKGQTVETAA 297
           + R   W     K  PL      +KK ++ E  A
Sbjct: 277 ANRLRTW-IETGKVTPLSSEAKQYKKQRSQEQIA 309