Pairwise Alignments

Query, 290 a.a., Transcriptional regulator, LacI family from Sphingobium sp. HT1-2

Subject, 339 a.a., LacI family transcription regulator (RefSeq) from Shewanella loihica PV-4

 Score =  128 bits (322), Expect = 2e-34
 Identities = 83/257 (32%), Positives = 135/257 (52%), Gaps = 6/257 (2%)

Query: 1   LAKGRSFLIGIVHNDRNALVLDTVQRGVGREATRRGYEVICHSTPLEEEGAIEDVLAFAR 60
           LA  +S++I  V+++ NA  +  +Q G+     +RGYE++ H    + +   ++++   R
Sbjct: 55  LAGTKSYVIAFVYDNPNAYYVIDMQNGILSSCKQRGYELLIHPCDAKSDNICQELVDMVR 114

Query: 61  RSRIDGLIVLPPVSG---IIGLPQALQAEQVAAVALSAVPIDGYGSVILSREADAAGAVA 117
            +R+ GL++ PP+S    ++     + A  V  +A   V     G  IL  +   A ++ 
Sbjct: 115 HARLSGLVLTPPLSEDPKVLAALDQINANYVRIIAGEEVSTTD-GLSILVNDKHGAVSIT 173

Query: 118 DYLVALGHQRIAMVTGPQTMISAIERRRGFIEALDRNGVAFLHE--IEGDYSLASGVAAA 175
            +L+ LGH+ IA ++G     S  ER  GF  AL  N ++      I G YS  SGV  A
Sbjct: 174 QHLIDLGHKNIAFLSGDHQHESTKERLAGFKAALQSNHLSLDESNIINGQYSFESGVEGA 233

Query: 176 EQLLSLSPLPTAIFAANDIMAAGILKVASERRISVPCPLSVVGFDGSLVAELLTPALTTV 235
           + LL+ +  PTAI A ND +AAG L  A    +++P  LS+VGF+ S  +    P LTTV
Sbjct: 234 KTLLAKANRPTAIVACNDEIAAGALFAARLAGVAIPDELSIVGFEDSPFSRQTWPKLTTV 293

Query: 236 ARPFGEMAEIATHQLVD 252
            +P   +A+ AT  L++
Sbjct: 294 HQPNKLIAQTATELLIE 310