Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 190 a.a., RNA polymerase sigma-E factor from Pseudomonas fluorescens FW300-N2E2

 Score = 43.1 bits (100), Expect = 3e-09
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 11/121 (9%)

Query: 50  EDMVQDTLIAVHTRRATYDPERA-FTAWLYAVARYKMIDHFRRVGRLRPIDDLADSL--V 106
           E++ QDT +++  R AT    RA F  WL+ +AR ++IDH+R+ G   P+ D  D    V
Sbjct: 51  EEIFQDTWLSL-IRSATQPQGRASFRTWLFQIARNRLIDHWRKQGVHNPLHDSYDEQLHV 109

Query: 107 ADEFEASSIARLDIN------DLLEQLPPKQARMIRAIRLEG-LSVAEAASAEGIGESDV 159
             +   S   +L ++      D   Q  P+  R +  +RL G L + + A+  G     V
Sbjct: 110 QPDDTTSPEQQLSLSRDQARLDAALQALPEDQREVFLLRLHGDLELPQIAALTGAPLETV 169

Query: 160 K 160
           K
Sbjct: 170 K 170