Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 184 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

 Score = 58.9 bits (141), Expect = 5e-14
 Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 3/142 (2%)

Query: 31  VPLLRGFYRRRVRGADDDIEDMVQDTLIAVHTRRATYDPERAFTAWLYAVARYKMIDHFR 90
           +P LR F    + G  D  +D+VQDT++    ++  ++      AWL+ + R ++    R
Sbjct: 16  LPSLRAFAMSLI-GRHDRADDLVQDTIMKAWAKQDHFEIGTNMKAWLFTILRNELYSQMR 74

Query: 91  RVGRLRPIDD--LADSLVADEFEASSIARLDINDLLEQLPPKQARMIRAIRLEGLSVAEA 148
           + GR     D  L ++L     +  S+   D    LEQLPP Q   I  +   G S  EA
Sbjct: 75  KRGREVQDSDGHLTETLAHHPEQYGSLDLQDFRRALEQLPPDQREAIILVGASGFSYEEA 134

Query: 149 ASAEGIGESDVKVSVHRGLKAL 170
           A+  G     +K  V+R  + L
Sbjct: 135 ATICGCALGTIKSRVNRARQRL 156