Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 181 a.a., sigma-70 family RNA polymerase sigma factor from Rhodopseudomonas palustris CGA009

 Score = 47.8 bits (112), Expect = 1e-10
 Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 7/149 (4%)

Query: 31  VPLLRGFYRRRVRGADDDIEDMVQDTLIAVHTRRATYDPERAFTAWLYAVARYKMIDHFR 90
           VP LR F    + G  D  +D+VQ+TL+       ++ P     AWL+ + R      +R
Sbjct: 15  VPSLRAF-AISLSGNADRADDLVQETLLRALANIDSFQPGSNLPAWLFTILRNLFRSDYR 73

Query: 91  RVGRLRPIDD----LADSLVADEFEASSIARLDINDLLEQLPPKQARMIRAIRLEGLSVA 146
           +  R R ++D     A +L +   + + +   +    L++LP  Q   +  +   G S  
Sbjct: 74  K--RRREVEDADGSYAKTLKSQPGQTAHLEFEEFRAALDKLPQDQREALILVGASGFSYE 131

Query: 147 EAASAEGIGESDVKVSVHRGLKALMARVH 175
           +AA+  G     +K  V+R    L A ++
Sbjct: 132 DAAAICGCAVGTIKSRVNRARSKLSALLY 160