Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 181 a.a., RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup) from Phaeobacter inhibens DSM 17395

 Score = 46.2 bits (108), Expect = 3e-10
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 8/131 (6%)

Query: 50  EDMVQDTLIAVHTRRATYDPERAFTAWLYAVARYKMIDHFRRVGRLRPIDDLADSLVADE 109
           +D+VQDTL+   T    ++      AWL+ + R       R+  R R ++D AD +++++
Sbjct: 30  DDLVQDTLVKAWTNIEKFEEGSNMRAWLFTILRNTYYSLRRK--RRREVED-ADGVLSEQ 86

Query: 110 FEA-----SSIARLDINDLLEQLPPKQARMIRAIRLEGLSVAEAASAEGIGESDVKVSVH 164
                     +   D N    QL  +Q   +  +   G S  EAA   G+    +K  V+
Sbjct: 87  LSQKPDHDGRLNMRDFNTAFAQLNDEQREALVLVGAGGFSYEEAAETCGVKVGTIKSRVN 146

Query: 165 RGLKALMARVH 175
           RG   L   +H
Sbjct: 147 RGRARLAELMH 157