Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 186 a.a., ECF subfamily RNA polymerase sigma-24 subunit from Klebsiella michiganensis M5al

 Score = 48.5 bits (114), Expect = 7e-11
 Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 34  LRGFYRRR--VRGADDDIEDMVQDTLIAVHTRRATYDPERAFTAWLYAVARYKMIDHFRR 91
           L+ F R R  +R   DDI   V   LI V        P     AWL+  AR +M D  R+
Sbjct: 22  LKAFIRGRTPLRDEADDILQEVTYQLIRVE------QPVENIAAWLFRAARNEMTDRARK 75

Query: 92  VGRLR-------------PIDDLADSLVA------DEFEASSIARLDINDLLEQLPPKQA 132
              L              P D+LA++L        DE+   ++   ++N  L +LPP Q 
Sbjct: 76  KRELPLAGGFSEEEEGDFPEDELAETLFGVPQTPEDEY-LKALLWEELNQALSELPPAQR 134

Query: 133 RMIRAIRLEGLSVAEAASAEGIGESDVKVSVHRGLKALMARV 174
                  L+G S  E A   G+ E  +    H+ +  L  R+
Sbjct: 135 EAFEKTELQGYSYRELAEESGVSEQALLSRKHKAVLYLRTRL 176