Pairwise Alignments

Query, 929 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

Subject, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (462), Expect = 3e-50
 Identities = 92/229 (40%), Positives = 141/229 (61%), Gaps = 1/229 (0%)

Query: 276 AIEAHDLTRRFGDFVAVDHVSFRIGRGEIFGFLGSNGCGKTTTMKMLTGLLDATDGTASL 335
           AI A ++ ++FG F A+++++ ++ RG I+GFLG NGCGK+TT+++LTGLL  T G   +
Sbjct: 5   AIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQIKV 64

Query: 336 FGRPIAPGDMETRMRVGYMSQAFSLYEELSVRQNLVLHARLYRVPRQQAGELVSAALAQF 395
            G  I       R+++GYM+Q FSLY++L+V++NL    +++ + R    +   A L  +
Sbjct: 65  LGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLKTY 124

Query: 396 ELEAHADAVPAALPLGIRQRLQLAAACLHRPEILILDEPTSGVDPAARDMFWRHLIRLSR 455
            L+       + +  G +QRL LAAA +H PE+L LDE TS VDP  R  FW  L  LS 
Sbjct: 125 GLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDLSA 184

Query: 456 DEGVTIFVSTHFMNEAERCDRISLMHRGRVLTVGAPTELTQRYDAQRLE 504
            +G TI V+TH+M+EAERC R+++M  G +     P +L Q+     +E
Sbjct: 185 -QGTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVE 232



 Score =  144 bits (363), Expect = 8e-39
 Identities = 79/239 (33%), Positives = 139/239 (58%), Gaps = 8/239 (3%)

Query: 8   LPEEAIRIESLSHRYGGIIALNEVSLSLPKGKTTALVGPDGVGKSTLLGLISGVKKLQTG 67
           + + AI  E++  ++G   A+  ++L + +G     +GP+G GKST + +++G+ +   G
Sbjct: 1   MSDYAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAG 60

Query: 68  RLSVLGFDLTERRKREEFLS-RVAYMPQGLGRNLYPTLSVRENIDFFGRLFGLSAVEREA 126
           ++ VLG  +    K+ E L  ++ YM Q    +LY  L+V+EN+ F G++FG++    + 
Sbjct: 61  QIKVLGLSIP---KQSELLRLKIGYMTQKF--SLYDDLTVQENLQFIGQIFGMNRSTLQQ 115

Query: 127 HMRRLLDATGLAPFPDRPAGKLSGGMKQKLGLCCSLVHDPDLLILDEPTTGVDPLSRRQF 186
             +  L   GL     +    +SGG KQ+L L  + +H+P+LL LDE T+ VDP +RR+F
Sbjct: 116 RTQAQLKTYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREF 175

Query: 187 WELVDAMCAERPDMTVLVSTAYMEEAERFGHLVAMDDGKVIAQGDTREIMRDAGADTLE 245
           WE +  + A+    T+LV+T YM+EAER   L  M+ G++ A  +  ++M+  G + +E
Sbjct: 176 WEQLFDLSAQ--GTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVE 232