Pairwise Alignments

Query, 929 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

Subject, 582 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  359 bits (921), Expect = e-103
 Identities = 227/569 (39%), Positives = 309/569 (54%), Gaps = 77/569 (13%)

Query: 13  IRIESLSHRYGGII-ALNEVSLSLPKGKTTALVGPDGVGKSTLLGLISGVKKLQTGRLSV 71
           +R+  ++ R+G    AL+ V+  +  G+ T LVGPDG GK+TL+ L++G+     G + V
Sbjct: 14  VRLTGVTKRFGTARPALDAVAGEIFGGRVTGLVGPDGAGKTTLIRLMTGLMLPDAGTIEV 73

Query: 72  LGFDLTERRKREEFLSRVAYMPQGLGRNLYPTLSVRENIDFFGRLFGLSAVEREAHMRRL 131
           LG+D   RR      + + YMPQ  G  LY  LSV+EN+D +  L GL   ER      L
Sbjct: 74  LGYDT--RRDPASIQAAIGYMPQRFG--LYEDLSVQENLDLYADLRGLPKTERSRTFGEL 129

Query: 132 LDATGLAPFPDRPAGKLSGGMKQKLGLCCSLVHDPDLLILDEPTTGVDPLSRRQFWELVD 191
           LD T LA F  R AGKLSGGMKQKLGL C+L+  P LL+LDEP  GVDP+SRR  W++V 
Sbjct: 130 LDFTDLARFTTRLAGKLSGGMKQKLGLACALLRKPRLLLLDEPGVGVDPISRRDLWKMVG 189

Query: 192 AMCAERPDMTVLVSTAYMEEAERFGHLVAMDDGKVIAQGDTREI---------------- 235
            +  E   + V+ STAY+EEAE   H+  ++ G ++  G   E+                
Sbjct: 190 NLRTE--GIGVVWSTAYLEEAEACDHVFLLNQGSLMFSGPPAEMTGRVEDRVFRLSGIRG 247

Query: 236 ---------MRDAGA--DTLEAAYVRLLPQ---------DKRPSGDALVVPA-------- 267
                    + D G     ++   +RL+ +         D   + DA V P         
Sbjct: 248 RRREALARFLEDEGVVDGVIQGEAIRLVMKAGLSPPPLGDTADAVDAAVTPPRFEDAFVD 307

Query: 268 -------------------WQDKGEAPAIEAHDLTRRFGDFVAVDHVSFRIGRGEIFGFL 308
                               +D G  P IEA  LT+RFGDF A D+++F I RGEIFG L
Sbjct: 308 MLGGGPGGRSRLAETQREFTEDAGR-PVIEARGLTKRFGDFTAADNITFDIPRGEIFGLL 366

Query: 309 GSNGCGKTTTMKMLTGLLDATDGTASLFGRPIAPGDMETRMRVGYMSQAFSLYEELSVRQ 368
           G NG GK+TT KML GLL  + G   + G  +     E R R+GYM+Q FSLY +LSV Q
Sbjct: 367 GPNGAGKSTTFKMLCGLLKPSAGEGRVAGFDLRRNAPEARNRLGYMAQKFSLYGDLSVIQ 426

Query: 369 NLVLHARLYRVPRQQAGELVSAALAQFELEAHADAVPAALPLGIRQRLQLAAACLHRPEI 428
           N    A +Y +   +  E +      F+     D     LPLG++QRL LA + LH PE+
Sbjct: 427 NFNFFAGVYGLSGARKRERIGLMSEIFDFRTILDMSAKDLPLGLKQRLALACSVLHEPEV 486

Query: 429 LILDEPTSGVDPAARDMFWRHLIRLSRDEGVTIFVSTHFMNEAERCDRISLMHRGRVLTV 488
           L LDEPTSGVDP  R  FW H+  L  ++GVT+ V+THFM+EAE CDRISL++RGR + +
Sbjct: 487 LFLDEPTSGVDPITRREFWTHINGLV-EKGVTVLVTTHFMDEAEYCDRISLIYRGRSIAL 545

Query: 489 GAPTELTQRYDAQRL-----EDAFIAVLE 512
           G+P ++  R   + L     EDAFIA+++
Sbjct: 546 GSPDDMKARVAGKDLPDPTMEDAFIALIQ 574



 Score =  145 bits (366), Expect = 7e-39
 Identities = 82/231 (35%), Positives = 129/231 (55%), Gaps = 2/231 (0%)

Query: 270 DKGEAPAIEAHDLTRRFGDF-VAVDHVSFRIGRGEIFGFLGSNGCGKTTTMKMLTGLLDA 328
           + G AP +    +T+RFG    A+D V+  I  G + G +G +G GKTT ++++TGL+  
Sbjct: 7   EPGTAPFVRLTGVTKRFGTARPALDAVAGEIFGGRVTGLVGPDGAGKTTLIRLMTGLMLP 66

Query: 329 TDGTASLFGRPIAPGDMETRMRVGYMSQAFSLYEELSVRQNLVLHARLYRVPRQQAGELV 388
             GT  + G          +  +GYM Q F LYE+LSV++NL L+A L  +P+ +     
Sbjct: 67  DAGTIEVLGYDTRRDPASIQAAIGYMPQRFGLYEDLSVQENLDLYADLRGLPKTERSRTF 126

Query: 389 SAALAQFELEAHADAVPAALPLGIRQRLQLAAACLHRPEILILDEPTSGVDPAARDMFWR 448
              L   +L      +   L  G++Q+L LA A L +P +L+LDEP  GVDP +R   W+
Sbjct: 127 GELLDFTDLARFTTRLAGKLSGGMKQKLGLACALLRKPRLLLLDEPGVGVDPISRRDLWK 186

Query: 449 HLIRLSRDEGVTIFVSTHFMNEAERCDRISLMHRGRVLTVGAPTELTQRYD 499
            +  L R EG+ +  ST ++ EAE CD + L+++G ++  G P E+T R +
Sbjct: 187 MVGNL-RTEGIGVVWSTAYLEEAEACDHVFLLNQGSLMFSGPPAEMTGRVE 236