Pairwise Alignments

Query, 929 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

Subject, 904 a.a., ribosome-associated ATPase/putative transporter RbbA from Rhodopseudomonas palustris CGA009

 Score =  969 bits (2505), Expect = 0.0
 Identities = 501/919 (54%), Positives = 640/919 (69%), Gaps = 22/919 (2%)

Query: 12  AIRIESLSHRYGGIIALNEVSLSLPKGKTTALVGPDGVGKSTLLGLISGVKKLQTGRLSV 71
           A R+  ++H YG   AL++V+L LP GK   L+GPDGVGKSTLL LI+GV+++Q+G +  
Sbjct: 5   AARLTHVTHTYGATHALDDVTLELPAGKMVGLIGPDGVGKSTLLALIAGVRRIQSGEVLA 64

Query: 72  LGFDLTERRKREEFLSRVAYMPQGLGRNLYPTLSVRENIDFFGRLFGLSAVEREAHMRRL 131
           L  D+ + R R +  +R+AYMPQGLGRNLYPTLSV EN+DFFGRLFG  A ER A +  L
Sbjct: 65  LDGDMRDARHRAQSAARIAYMPQGLGRNLYPTLSVFENLDFFGRLFGQGAAERNARIADL 124

Query: 132 LDATGLAPFPDRPAGKLSGGMKQKLGLCCSLVHDPDLLILDEPTTGVDPLSRRQFWELVD 191
           L ATGL+PF DRPAGKLSGGMKQKL LCC+L+HDPDLLILDEPTTGVDPLSRRQFWEL+D
Sbjct: 125 LRATGLSPFGDRPAGKLSGGMKQKLSLCCALIHDPDLLILDEPTTGVDPLSRRQFWELID 184

Query: 192 AMCAERPDMTVLVSTAYMEEAERFGHLVAMDDGKVIAQGDTREIMRDAGADTLEAAYVRL 251
            +   RP M+VLV+TAYMEEAERF  L A++DGKVI  G   E+       TL+AA++ L
Sbjct: 185 RIRKRRPQMSVLVATAYMEEAERFDWLAALNDGKVIGAGTPAELRAQTKQPTLDAAFIAL 244

Query: 252 LPQDKRPSGDALVVPAWQDKGEAPAIEAHDLTRRFGDFVAVDHVSFRIGRGEIFGFLGSN 311
           LP + R +   +V+P   + G+  AIEA +LT RFGDF AVDHV+F+I RGEIFGFLGSN
Sbjct: 245 LPAEMRANYADVVLPPLPNSGDGYAIEAENLTCRFGDFTAVDHVNFQIKRGEIFGFLGSN 304

Query: 312 GCGKTTTMKMLTGLLDATDGTASLFGRPIAPGDMETRMRVGYMSQAFSLYEELSVRQNLV 371
           GCGK+TTMKMLTGLL  T+G A LFG  +   DM TR RVGYMSQ+FSLY EL+VRQNL+
Sbjct: 305 GCGKSTTMKMLTGLLTPTEGEARLFGEVLDASDMATRKRVGYMSQSFSLYSELTVRQNLL 364

Query: 372 LHARLYRVPRQQAGELVSAALAQFELEAHADAVPAALPLGIRQRLQLAAACLHRPEILIL 431
           LHA+L+ +P  Q  + V+  L +F+L   AD+ P +LPLG+RQRLQLA A +HRPE+LIL
Sbjct: 365 LHAQLFELPSAQIPDRVAEMLTRFDLADAADSRPDSLPLGMRQRLQLAVAVIHRPEVLIL 424

Query: 432 DEPTSGVDPAARDMFWRHLIRLSRDEGVTIFVSTHFMNEAERCDRISLMHRGRVLTVGAP 491
           DEPTSGVDP ARD FWR LI LSR++GVTIF+STHFMNEAERCDRISLMH G+VL VGAP
Sbjct: 425 DEPTSGVDPVARDSFWRMLIALSREDGVTIFISTHFMNEAERCDRISLMHAGKVLAVGAP 484

Query: 492 TELTQRYDAQRLEDAFIAVLEKDNDEAPTASAHLPVDASVASSTPAAGARSTAPGRPRLP 551
            EL +R  A  LE  FIA LE+                   ++        T+   PR  
Sbjct: 485 HELVERRGAADLEQTFIAYLEE-------------------ATGAQRDGEETSFAAPREA 525

Query: 552 TAAGSW--PGFAWAFARREATELMRDRIRLAFALIGPIILLCIAAYSISFDVQNIRLAVL 609
                W  P   WA+ARRE  E++RDR+RLAFA++GP++L+    + ISFDV+N+  AV 
Sbjct: 526 DTRQRWFDPARLWAYARRETMEILRDRLRLAFAILGPLVLMLTFGFGISFDVENLTYAVY 585

Query: 610 DHDRSAASRDLQLYFEGSRYFRVEPELASDAAADQALREASTKMVLDIPPGFGRDLTAGR 669
           D D +  SR+L   F GSRYF+  P++ S A  D+ L     K+V+++P GFGRDL   +
Sbjct: 586 DQDNTLESRELLESFSGSRYFQQAPDIKSAAEIDRRLASGELKLVIEVPHGFGRDLLTNK 645

Query: 670 RPAVDVRIDGASPFPASNARAYAEAVLLRYAMDQLRSAQPFAVPDLSSTIEPRFIYNQEF 729
            P V V IDGA PF A   R+Y   +   Y  +Q R     A P     IE RF YNQ F
Sbjct: 646 SPEVAVWIDGAMPFRAETIRSYVTGLSQAYLAEQYR-RHAMASPTAPINIETRFRYNQAF 704

Query: 730 RSIYAMAPGVLMLCMILIPAMLTALGVVREKEIGSITNLYASPASLGAFLVGKQMPYALL 789
           +S+Y++ PGV+ L ++LIPAMLTA+GVVREKE+GSITN  ++P +   FL+GKQ+PYALL
Sbjct: 705 KSVYSIIPGVITLILMLIPAMLTAVGVVREKEVGSITNFRSTPVTATEFLLGKQIPYALL 764

Query: 790 AMISFVTLILVTVFILGVPLKGSLPALLIGGFLFILSVTGLGLMISAFVRSQVAAIFATS 849
           +  SF+ L+L  + I GVP++GS+ AL+ G  L++ S T LG++ S+F+ +Q+AAIF  +
Sbjct: 765 SFFSFLLLLLGAIVIFGVPVRGSVIALVGGALLYVFSTTALGVLFSSFLSTQIAAIFIVA 824

Query: 850 LICLIPSVNFSGLLYPVSTLTGPSHIIGLTFPSSWFQIVSLGTFTKGLGMASFGQAYLAL 909
           +I +IP+VNFSGLL PVS+L+    + G  FP++WFQ VS+G FTKG+G        L L
Sbjct: 825 IISIIPAVNFSGLLVPVSSLSQVGRLFGEAFPAAWFQEVSIGAFTKGMGFWMLAPNLLIL 884

Query: 910 MALAFLFVGGARLMLGKQE 928
                +++ GA L L KQE
Sbjct: 885 FGFGLVYLIGAILALRKQE 903