Pairwise Alignments

Query, 188 a.a., sigma-24 (FecI-like) protein from Sphingobium sp. HT1-2

Subject, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

 Score = 57.0 bits (136), Expect = 2e-13
 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 5/149 (3%)

Query: 36  VHRLVRSHVGSPDEALDVTQASFVAAFSALSRYDGTRPFPVWMSRIVINKCHDWRRRRAV 95
           + R   S  GS D A D+ Q++   A ++  R++    F  W+ RI+ N   D  RR+  
Sbjct: 19  LRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLWIDQVRRQKT 78

Query: 96  RNFFSFALPLGEAEHIVDDAPSADRALDAEQQLAEAMTAIAALPASLKDTLILRTIDEKS 155
                    + E   I     S +R  +A   L     AI  LP   ++ ++L  ++E S
Sbjct: 79  AGVQD---DITERHDIAGS--SGERETEARLTLKTVAEAITELPDEQREVVLLVCVEELS 133

Query: 156 EAETAEILGISQKAVETRLYRARARLAES 184
             E A+++GI    V +RL RAR  LAE+
Sbjct: 134 YREAADVMGIPIGTVMSRLMRARRSLAEA 162