Pairwise Alignments

Query, 188 a.a., sigma-24 (FecI-like) protein from Sphingobium sp. HT1-2

Subject, 227 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

 Score = 66.2 bits (160), Expect = 4e-16
 Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 5/170 (2%)

Query: 23  AAYGELVRRHQGWVHRLVRSHVGSPDEALDVTQASFVAAFSALSRYDGTRPFPVWMSRIV 82
           A +  +++ H   ++R+ RS + +  +A DV Q ++V AF+    + G      W++RIV
Sbjct: 20  ARFRAIMQAHNRKLYRIARSILRNDSDAEDVLQEAYVRAFTRFEDFRGDAAITTWLARIV 79

Query: 83  INKC-HDWRRRRAVRNFFSFALPLGEAEHI---VDDAPSADRALDAEQQLAEAMTAIA-A 137
           IN+     R+ R       +     EAE I   ++   S      A++Q+ + +  +   
Sbjct: 80  INEALGRLRKGRRQMRLAKYMRQSQEAEIIAFPLNSGISDPEKTMAQRQILDLVERLTDD 139

Query: 138 LPASLKDTLILRTIDEKSEAETAEILGISQKAVETRLYRARARLAESLKK 187
           LP + +   +LR I+     E A +LG+  +   TRL+RAR  L E L++
Sbjct: 140 LPDTYRTVFVLRVIEGLDNEEAAALLGLKPETARTRLHRARRILKEQLER 189