Pairwise Alignments

Query, 840 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) / Cytochrome c oxidase polypeptide III (EC 1.9.3.1) from Sphingobium sp. HT1-2

Subject, 545 a.a., cytochrome c oxidase, subunit I from Pseudomonas stutzeri RCH2

 Score =  367 bits (943), Expect = e-106
 Identities = 185/498 (37%), Positives = 285/498 (57%), Gaps = 7/498 (1%)

Query: 25  PPRGIFLRWTDCNNNRVGVWYVLTAFGFMLFAGVLALIMRTQLAVPDNDLVGPGTFNQLF 84
           P +G+       N+  +G  Y+  +F   L  G +A+++R +L  P   +V P  FNQ+ 
Sbjct: 19  PAKGLSRWLLTTNHKDIGSMYLWFSFCAFLLGGSMAMVIRAELFQPGLQIVQPEFFNQMT 78

Query: 85  TLHGSMMMFLFAVPMFEAVSIILLPQLLGARDLPFPRLSAFGYWSFLIG-GLFVGGSIFF 143
           T+HG +M+F   +P F  ++  ++P ++GA D+  PR++ F +W      GL V      
Sbjct: 79  TMHGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFGLLVSTLFME 138

Query: 144 NAAPDGGWFMYPPLTTRTDLSGLGADIWMLGLSFIEVSSVAAAVELIVGVLKCRPPGMRL 203
              P+ GW  Y PL+T    +      ++  +  + +SS+  A+ +I  +L  R PGM L
Sbjct: 139 GGGPNFGWTFYAPLSTT--YAPESVTFFIFAIHLMGISSIMGAINVIATILNLRAPGMTL 196

Query: 204 NLMPLYAWYILVVAVMILFAFPPLIAGDILFEMERLLDWPFFDARRGGDPLLWQHLFWIF 263
             MPL+ W  L+ A +++   P L     +  M+      FF A  GGDP+L+QH+FW F
Sbjct: 197 MKMPLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFF 256

Query: 264 GHPEVYIIFLPSIALFAMLVPTFANRHLLGYPWIVLAAVGTAFLSFGLWVHHMFTTGLPK 323
           GHPEVYI+ LP+    + ++P F+ + L GY  +V A    AFLSF +W HHMFT G+P 
Sbjct: 257 GHPEVYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFTVGIPL 316

Query: 324 ISLAFFSAASEAVAIPTGVQIFVFIATLWAGRVTWSTPLLYATGSLAIFVIGGLTGVMVA 383
               FF  A+  +A+PTGV++F +++T+W G +T+  P+L+A   + +F IGG +G+M+A
Sbjct: 317 TGELFFMYATMLIAVPTGVKVFNWVSTMWRGSLTFEAPMLFAVAFVILFTIGGFSGLMLA 376

Query: 384 VAPFDWQAHDSYFIVAHLHYVLIGGTLMPLFAGLYYYWPLVTGKKLSDRLGRVAFWMLFV 443
           +AP D+Q HD+YF+VAH HYVL+ G +  +FA  YY+ P  TG    + L ++ FWM F+
Sbjct: 377 IAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLAKLHFWMSFI 436

Query: 444 GANLTFFPMHLSGLMGMPRRVFTYPAELGLGGLNMASTLGAWLF-AAGVAVICVDLSLSP 502
           G NL FFPMH  GL GMPRR+  Y   +     NM S++GA++F A  +  + + +    
Sbjct: 437 GMNLAFFPMHFVGLAGMPRRIPDY--NMMFANFNMVSSVGAFMFGATQLLFLFIVIKCIR 494

Query: 503 RRVRAVRNPWN-AGTLEW 519
             V A   PW+ A  LEW
Sbjct: 495 GGVPARAKPWDGAEGLEW 512