Pairwise Alignments

Query, 840 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) / Cytochrome c oxidase polypeptide III (EC 1.9.3.1) from Sphingobium sp. HT1-2

Subject, 551 a.a., cbb3-type cytochrome c oxidase subunit I from Sinorhizobium meliloti 1021

 Score = 63.5 bits (153), Expect = 3e-14
 Identities = 112/493 (22%), Positives = 186/493 (37%), Gaps = 64/493 (12%)

Query: 40  RVGVWYVLTAFGFMLFAGVLALIMRTQLAVPD-NDLVGPGTFNQLFTLHGSMMMFLFAVP 98
           + GVW+ L    F +F GV A     QLA P  N      +F ++   H + ++F F   
Sbjct: 76  KAGVWFTLFWAIFGMFIGVWAA---AQLAWPSLNFDTAWASFGRIRPAHTTGVIFGFGGN 132

Query: 99  MFEAVSIILLPQLLGAR--DLPFPRLSAFGYWSFLI---GGLFVGGSIFFNAAPDGGWFM 153
              A S  ++ +   AR  D   P    FGY  F I    G F+G +     A +  W+ 
Sbjct: 133 ALIATSFHVVQRTSRARLADQLSPWFVLFGYNLFCILAVTGYFMGVTQSKEYA-EAEWY- 190

Query: 154 YPPLTTRTDLSGLGADIWMLGLSFIEVSSVAAAVELIVGVLKCRPPGMRLNLMPLYAWYI 213
                         AD+W++      +  V   +  I  + + R P + +       WY 
Sbjct: 191 --------------ADLWLV------IVWVTYFILYIRTLARRREPHIYVA-----NWYY 225

Query: 214 L--VVAVMILFAFPPLIAGDILFEMERLLDWPFFDARRGGDPLLWQHLFWIFGHPEV-YI 270
           +  +V V IL     L     L   +    W       G    + Q   W +GH  V + 
Sbjct: 226 MAFIVVVAILHIINNLTVPVSLGHAKSYTIWS------GVQDSMVQ---WWYGHNAVAFF 276

Query: 271 IFLPSIALFAMLVPTFANRHLLGYPWIVLAAVGTAFLSFGLWVHHMFTTGLPKISLAFFS 330
           +    +A+    +P  A R +  Y   +L+  G  F       HH+  T LP        
Sbjct: 277 LTAGFLAMLYYYLPKRAERPIFSYRLSILSFWGITFFYMWAGSHHLHYTALPHWVQNLGM 336

Query: 331 AASEAVAIPTGVQIFVFIATL---WAGRVTWSTPLLYATGSLAIFVIGGLTGVMVAVAPF 387
             S  + +P+       + TL   W  +V     L +   +   + +    G  +AV P 
Sbjct: 337 TFSVMLLVPSWASAGNALLTLNGAW-HKVRDDATLRFIMMAAFFYGLSTFEGSFLAVRPV 395

Query: 388 DWQAHDSYFIVAHLHYVLIGGTLMPLFAGLYYYWPLVTGKK--LSDRLGRVAFWMLFVGA 445
           +  +H + + V H+H   +G   +  +  LY   P +  ++   S  L  V FW+ F G 
Sbjct: 396 NSLSHYTDWTVGHVHAGALGWVALITYGSLYTLVPAIWKRERMYSAALVEVHFWLAFAGT 455

Query: 446 NLTFFPMHLSGLM-GMPRRVFTYPAELGLGGLN---------MASTLGAWLFAAGVAVIC 495
            +  F M  SG++ G+  R +T    L    ++         +A   G  LF  G  V  
Sbjct: 456 VIYVFAMWNSGIIQGLMWRTYTGDGTLAYSFVDSLVAMYPYYIARAFGGLLFLIGAVVAT 515

Query: 496 VDLSLSPRRVRAV 508
            ++ ++ R V A+
Sbjct: 516 YNIWMTVRGVPAL 528



 Score = 25.4 bits (54), Expect = 0.009
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 33  WTDCNNNRVGVWYVLTAFGFMLFAGVLALI 62
           W+   ++ V  WY   A  F L AG LA++
Sbjct: 256 WSGVQDSMVQWWYGHNAVAFFLTAGFLAML 285