Pairwise Alignments

Query, 840 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) / Cytochrome c oxidase polypeptide III (EC 1.9.3.1) from Sphingobium sp. HT1-2

Subject, 669 a.a., cytochrome o ubiquinol oxidase subunit I from Sinorhizobium meliloti 1021

 Score =  338 bits (868), Expect = 5e-97
 Identities = 175/518 (33%), Positives = 285/518 (55%), Gaps = 8/518 (1%)

Query: 34  TDCNNNRVGVWYVLTAFGFMLFAGVLALIMRTQLAVPDNDLVG---PGTFNQLFTLHGSM 90
           T  ++ ++G+ Y++ A   +L     A++MR Q A+      G   P  ++Q+FT HG +
Sbjct: 60  TSVDHKKIGIMYIILALVMLLRGFSDAIMMRLQQAMAFGGSEGYLPPHHYDQVFTAHGVI 119

Query: 91  MMFLFAVPMFEAVSIILLPQLLGARDLPFPRLSAFGYWSFLIGGLFVGGSIFFNAAPDGG 150
           M+F  A+P    +   ++P  +GARD+ FP L+ F +W    G + +  S+F       G
Sbjct: 120 MIFFMAMPFVTGLMNFVVPLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFVGEFARTG 179

Query: 151 WFMYPPLTTRTDLSGLGADIWMLGLSFIEVSSVAAAVELIVGVLKCRPPGMRLNLMPLYA 210
           W  YPPL+      G+G D ++ GL    + +  + + LI  ++K R PGM +  MP++ 
Sbjct: 180 WLAYPPLSGADYSPGVGVDYYVWGLQIAGIGTTLSGINLIATIVKMRAPGMTMMKMPVFT 239

Query: 211 WYILVVAVMILFAFPPLIAGDILFEMERLLDWPFFDARRGGDPLLWQHLFWIFGHPEVYI 270
           W  L   V+I+  FP L A   L  ++R     FF    GG+P+++ +L WI+GHPEVYI
Sbjct: 240 WTSLCTNVLIVATFPVLTATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYI 299

Query: 271 IFLPSIALFAMLVPTFANRHLLGYPWIVLAAVGTAFLSFGLWVHHMFTTGLPKISLAFFS 330
           + LP+  +F+ +V TF  + L GY  +V A V    LS+ +W+HH FT G      AFF 
Sbjct: 300 LILPAFGIFSEVVATFCGKRLFGYASMVYATVVITILSYIVWLHHFFTMGSGASVNAFFG 359

Query: 331 AASEAVAIPTGVQIFVFIATLWAGRVTWSTPLLYATGSLAIFVIGGLTGVMVAVAPFDWQ 390
             +  ++IPTG ++F ++ T++ GR+ +  P+L+  G +  FV+GG+TGV++AV P D+ 
Sbjct: 360 ITTMIISIPTGAKMFNWLFTMYRGRIRYEVPMLWTIGFMVTFVLGGMTGVLLAVPPADFV 419

Query: 391 AHDSYFIVAHLHYVLIGGTLMPLFAGLYYYWPLVTGKKLSDRLGRVAFWMLFVGANLTFF 450
            H+S F++AH H V+IGG +  L AG+ Y++P   G +L    G+++FW    G    F 
Sbjct: 420 LHNSLFLIAHFHNVIIGGVVFGLMAGVVYWFPKAFGFRLDPFWGKMSFWFWLTGFYFAFM 479

Query: 451 PMHLSGLMGMPRRVFTYPAELGLGGLNMASTLGAWLFAAGVAVICVDLSLSPRRVRAVR- 509
           P+++ GLMG+ RRV  +  +  L    + +  GA+L A G+  + + L +S  R   +R 
Sbjct: 480 PLYVLGLMGVTRRVSQF-EDPSLQIWFVIAAFGAFLIALGILSMLIQLVVSFVRREELRD 538

Query: 510 ---NPWNAGTLEWLAHPEDEDWGIRSVPLIESRYPIWD 544
              +PW+  TLEW       D+     PL+  +   WD
Sbjct: 539 TTGDPWDGRTLEWSTASPPPDYNFAFTPLVHDQDSWWD 576



 Score = 26.6 bits (57), Expect = 0.005
 Identities = 10/38 (26%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 28  GIFLRWTDCNNNRVGVWYVLTAFG-FMLFAGVLALIMR 64
           G+  R +   +  + +W+V+ AFG F++  G+L+++++
Sbjct: 488 GVTRRVSQFEDPSLQIWFVIAAFGAFLIALGILSMLIQ 525