Pairwise Alignments

Query, 840 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) / Cytochrome c oxidase polypeptide III (EC 1.9.3.1) from Sphingobium sp. HT1-2

Subject, 841 a.a., cytochrome c oxidase subunit I from Sinorhizobium meliloti 1021

 Score =  768 bits (1984), Expect = 0.0
 Identities = 401/830 (48%), Positives = 536/830 (64%), Gaps = 17/830 (2%)

Query: 19  LRAVWAPPRGIFLRWTDCNNNRVGVWYVLTAFGFMLFAGVLALIMRTQLAVPDNDLVGPG 78
           L  +WA PRG  L  T  NN  +G+ Y+  AF F L AG+LA++MRTQLA+ DN LV   
Sbjct: 18  LERIWATPRGWRLV-TAVNNTVIGLLYLGVAFLFFLMAGLLAVVMRTQLALGDNRLVDQD 76

Query: 79  TFNQLFTLHGSMMMFLFAVPMFEAVSIILLPQLLGARDLPFPRLSAFGYWSFLIGGLFVG 138
            +NQ+FT+HG+ MMFLFAVP  EA+ ++LLPQ+L ARDLPFPRLSAF  W++++GGL   
Sbjct: 77  LYNQMFTVHGTTMMFLFAVPAVEALGVMLLPQMLAARDLPFPRLSAFAIWAYVVGGLVFF 136

Query: 139 GSIFFNAAPDGGWFMYPPLTTRTDLSGLGADIWMLGLSFIEVSSVAAAVELIVGVLKCRP 198
            +IF++ AP GGWFMYPPLT      G  AD W+LG+ FIE+S++A AVE++VG L+ RP
Sbjct: 137 STIFYDLAPKGGWFMYPPLTLMEYSPGDNADFWLLGIGFIEISAIAGAVEIVVGALRTRP 196

Query: 199 PGMRLNLMPLYAWYILVVAVMILFAFPPLIAGDILFEMERLLDWPFFDARRGGDPLLWQH 258
           PGM L  MP++AW +L+ A MI+FAFP +I   ++ E+ER   WPFF A  GGDPLLWQH
Sbjct: 197 PGMSLAKMPIFAWTMLIFASMIMFAFPAVILATMMLEIERAFGWPFFTAALGGDPLLWQH 256

Query: 259 LFWIFGHPEVYIIFLPSIALFAMLVPTFANRHLLGYPWIVLAAVGTAFLSFGLWVHHMFT 318
           LFW FGHPEVYIIFLP+  L +M+VPT A   L+GY  IV+A +GT F SFGLWVHHMFT
Sbjct: 257 LFWFFGHPEVYIIFLPAAGLVSMMVPTMARTPLVGYHLIVVALIGTGFFSFGLWVHHMFT 316

Query: 319 TGLPKISLAFFSAASEAVAIPTGVQIFVFIATLWAGRVTW--STPLLYATGSLAIFVIGG 376
           TG+P +SLAFFSAAS AVA+P+G+Q+F +IAT+ AGR  +  +T  L+  G L IF +GG
Sbjct: 317 TGIPALSLAFFSAASMAVAVPSGIQVFSWIATIAAGRERFRITTASLFILGFLFIFTLGG 376

Query: 377 LTGVMVAVAPFDWQAHDSYFIVAHLHYVLIGGTLMPLFAGLYYYWPLVTGKKLSDRLGRV 436
           LTGVMVA+ PFD Q HD+YF+VAH HYVLIGG + PLFA +YY+ PL + + LS+RLGR 
Sbjct: 377 LTGVMVAMVPFDHQVHDTYFVVAHFHYVLIGGFVFPLFAAIYYWMPLFSRRMLSERLGRW 436

Query: 437 AFWMLFVGANLTFFPMHLSGLMGMPRRVFTYPAELGLGGLNMASTLGAWLFAAGVAVICV 496
            FW++F+G N+TF PMHL+GL GMPRRV+TYP E+G   LN+ ST+G ++ A GV V  V
Sbjct: 437 VFWLIFIGFNVTFLPMHLTGLRGMPRRVWTYPGEMGWDTLNLISTVGTYVLAVGVLVFLV 496

Query: 497 DLSLSPRRVRAVR-NPWNAGTLEWLAHPEDEDWGIRSVPLIESRYPIWDQTDFVRKVDEG 555
           DL+   R     + NPW AGTLEWL  P D  +  RS+P I SR P+WD+    ++V +G
Sbjct: 497 DLAAKFRLGNGPQENPWGAGTLEWL--PNDV-YSTRSIPHITSREPLWDRPSLPQEVRDG 553

Query: 556 RFFLPDAEEGRRETIVTSVLDARPLAVIRLGTPSIKPMLTAVALGGVFILTTYHLYWAAL 615
             +LP+A  G RETIVTS + ARP  VI++  P   P L AV     F+L T  +   A 
Sbjct: 554 HHYLPNAPTGWRETIVTSPIHARPQYVIQMPGPGWPPFLAAVFTAAFFLLLTVKMVTIAT 613

Query: 616 VSGVATLAMALWWLWTGTAEIPEKPCKPIGHGLELPLYLSGPSAPGWWAMFITMMADATA 675
           + GV  +A  L W W G    P K    I  G+ LP Y+SGP++  WWAM + M   A+ 
Sbjct: 614 ICGVLAIAFILVWAW-GLDPGPSKGMIEIAKGVRLPTYMSGPTSHSWWAMVVLMFVAASL 672

Query: 676 FSGLVFGYFFFWTRHAD-FPPVALADGPGMAWPM-LALFLGIASWLLTLGAREVHVRKHV 733
           +   VF Y F W    + + P+   + P + WP+  A  L   S +L L +R + V    
Sbjct: 673 YLAYVFSYLFLWVVSPEVWAPIGSPEPPPLGWPLGSAALLLAGSGILWLVSRRLGV---F 729

Query: 734 GMARLCLMVALLLGLAGIGAGLA----GPWTHGMDPQAHSYPAIVWTLAIWAAAHAGVAA 789
             +R+ + VALLL LA +    A    G    G+ P+ ++Y A+V+  A+  A       
Sbjct: 730 SASRVAMSVALLLSLACLTGAFALELRGHLATGLSPKGNAYGAMVYLGAVLFAQLVFALV 789

Query: 790 IMQGYALARSLAGRMDPVHDADLRNVTVYMHFYALTAIVTYATIGLFPQV 839
           IM  +A+AR LA ++D V      +  +  H+    +++    I  FP++
Sbjct: 790 IMGLFAMARHLAAKLDAVRRVTYDSYALLYHYTVAQSLLGLGLIHGFPRL 839