Pairwise Alignments

Query, 509 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 360 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

 Score =  111 bits (277), Expect = 5e-29
 Identities = 83/269 (30%), Positives = 128/269 (47%), Gaps = 37/269 (13%)

Query: 224 PFDMLGNLLGFLVLANLTAVASCIGQAWRRGSSAAQSLGGAWALPMTVLASTNFFDADAM 283
           PF +LG  LG LV + + A  + +G         AQ  G +W  P  +  +       A 
Sbjct: 125 PFFVLGQRLGLLV-SIVFATTATVGVTILAVLDGAQ--GFSWIAPFNLAGALAGCTVLAY 181

Query: 284 FWGGGSQILVLFAAAWQTLWLSAAASRAHARLRMERDFARLAEAKAHELARRDVLTGLPN 343
           F+ G                     +RA A  ++E             LA+ D LTGL N
Sbjct: 182 FYEG---------------------TRAKAARQLET------------LAKSDPLTGLAN 208

Query: 344 RRGFTERAGGMLEGLPASGALVALLLIDVDWFKSINDVYGHEAGDHVLAAIGRCIARHEN 403
           RRG  +  GG +     +   ++LL++D+D FKSIND YGHEAGD VL  +   I     
Sbjct: 209 RRGLLDAFGGAVLTRSRAPHRLSLLVLDLDHFKSINDRYGHEAGDGVLCHVAHVIKGMIR 268

Query: 404 SSCAVCRLGGEEFAMMITGAEIGNIEQFAKTLRRTLANLSHGDIIGNRMVTVSIGVT-AS 462
           ++  + R+GGEEFA+++   ++    + A+ +R+ + + +     G+  VTVSIGV    
Sbjct: 269 ANDLIARIGGEEFALLLPDTDLAGAREVAEKIRKAIESTALIGPGGSLSVTVSIGVAELD 328

Query: 463 ASRVDFGTLYRLADEALYDAKRGGRDQIA 491
               DF  L+  AD  LY AK+ GR++++
Sbjct: 329 PQYPDFAALFSSADHRLYQAKKAGRNRVS 357