Pairwise Alignments

Query, 334 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

 Score =  210 bits (534), Expect = 4e-59
 Identities = 119/311 (38%), Positives = 170/311 (54%)

Query: 19  VAGVIVVVVIVLGLWLASRPAPEQLQGMVDADEVNVGTKALARVERLIAEEGQRVQPGTL 78
           +  V VV  I    + A +P P  LQG +++ + ++ +K   R+++++  +G +V+ G L
Sbjct: 11  LTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQL 70

Query: 79  LATLSSPEIAGGQAQAQGALDAARAVASETNEGARSEDIATLRSTWQAAQAAADLAAVTS 138
           + TL SPEI     QA     AA A+A E   GAR + I   +  W  AQAAA+LA  T 
Sbjct: 71  IFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTY 130

Query: 139 RRTANLYAQGVVAAQRRDEAAAARDSSARNAEAARQQYLKALAGARPQNKQAANAQVRIA 198
            R  NLY  GVV+ Q+RDEA     ++     AA Q Y  A  GAR + KQAA  + R+A
Sbjct: 131 LRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQAALEKARMA 190

Query: 199 EAALRTANALDRETQLFSPIAGEVARKLVQPGEVVSPVIPAYQVIDIDHPWVALNLREDR 258
             A+    A   +T++ S   GEV++ L+  GE+     P   V+D    W   N+RED 
Sbjct: 191 AGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDL 250

Query: 259 YHGLGIGSVLHGHIPALQRDADFKVYLVAPRGDFATWRATREASGYDVRTFEIRLHPVSP 318
                 G+    ++PAL +  +FKV  VA  GDFATWR+T    G+D+RTFE+   PV+P
Sbjct: 251 LKHFTQGAQFTAYLPALNKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTFEVEARPVTP 310

Query: 319 IEKLRPGMSVL 329
            E LR GMSV+
Sbjct: 311 TEGLRMGMSVV 321