Pairwise Alignments

Query, 377 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 67.0 bits (162), Expect = 8e-16
 Identities = 80/345 (23%), Positives = 143/345 (41%), Gaps = 32/345 (9%)

Query: 5   RRALTREVHHLRRDRWDLAGITLLPGFLIFIVAALFWQGPLRQVPLGIVDGDGSTASRAV 64
           +  L +E   L RDR     + ++P  +  ++        +R +P+G+VD   S+ SR +
Sbjct: 8   KAVLVKEFRQLSRDRITFGMVVMIP-LIQLLLFGFAINTDVRNIPIGVVDQSDSSFSRLL 66

Query: 65  IRALDASPLIRFGGYYPGEVDAVRAVRSGKIMGFAHIPAGLGESVARHREPVVRILYNGS 124
           + ++  + +IR   +Y    +A +A+ SG I     +P+ L     + RE + + L +GS
Sbjct: 67  VESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDLVARSQQQRE-LGQWLIDGS 125

Query: 125 FLTAGGQVARAAEEAVTEALPEIAANQL-PNHAVPA--SRVRRLAVEATPLGNAPSSFEW 181
                G +       +T+ LP +    L P   +    +  RR AV   P          
Sbjct: 126 DTMIAGALLGLKNMPLTD-LPTLGIQPLTPTFEITLLYNPSRRSAVNIVP---------- 174

Query: 182 FLGLLIFPAVLHLIAACVCAMAIGRELKGKSLSEWARASGGVAPAMAGKMLPYV------ 235
             GLL    +L +      + AI RE +  +L             M GK++PY+      
Sbjct: 175 --GLL--GVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQ 230

Query: 236 LAISGWGLAWLLYLTLARGWRIEGSILLIACGQTLFYAATAAVAALLVAVTSETATALSA 295
           +AI   GL   ++        I G++  I  G  LF +A+  +  ++  + +    A+  
Sbjct: 231 VAII-LGLGHFIFAV-----PINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQM 284

Query: 296 SAVYAGSALAYSGATLPLNGGNAFARTWSNVLPLTHYIALQMGQV 340
           +      ++  SG   P  G    A+  S +LP TH++ L  G V
Sbjct: 285 TVFILLPSILLSGFMFPYEGMPTAAQWLSELLPATHFMRLIRGIV 329