Pairwise Alignments

Query, 331 a.a., TPP-requiring enzyme co-localized with putative O-antigen rfb gene cluster from Sphingobium sp. HT1-2

Subject, 573 a.a., acetolactate synthase 3 large subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  150 bits (379), Expect = 7e-41
 Identities = 101/287 (35%), Positives = 149/287 (51%), Gaps = 13/287 (4%)

Query: 12  SDWLASWLAANGIEQIFMLTGGGAMHLNHSMGTHPD-LKTIFTHHEQALSMAAEAYARLT 70
           ++ +   L   G+EQIF   GG  + +  ++    D +K +   HEQA +  A+ YAR T
Sbjct: 7   AEMIVQSLINEGVEQIFGYPGGSVLDIYDALHEKTDQIKHVLVRHEQAATHMADGYARAT 66

Query: 71  NKPAVVNVTSGPGGTNAITGVYGAYVDSIPMLVISGQVKRETTVRSTGLPLRQLGDQELD 130
            KP VV V SGPG TN +TG+  AY+DSIPM+VISG V       +T L +     QE D
Sbjct: 67  GKPGVVLVCSGPGATNTVTGIATAYMDSIPMIVISGNV-------ATNL-IGNDAFQECD 118

Query: 131 IEELVRPVTKYAVMVNDPQSIRYHMEKALHLATRGRPGPVWIDIPLDVQA--SKIDPDSL 188
           I  + RP+ K++ +V   + I   ++KA ++A+ GRPGPV ID+P DV +  +K+ P   
Sbjct: 119 IVGVSRPIVKHSFLVKKAEDIPETIKKAFYIASTGRPGPVVIDVPKDVMSPLNKL-PYEY 177

Query: 189 AGFDPAELDEPWRAANLDQISRDILDRLQKAERPVVFAGGGVRLSGAHRDFLALIERLGV 248
                     P  A +  QI +  L  L  A++PV++ GGG  ++ A +    L E L +
Sbjct: 178 PETIKMRSYNPTTAGHKGQIKKG-LRALLDAKKPVLYVGGGAIIANADQQIRQLAEALNL 236

Query: 249 PVVTGWNAHDALWNDHPLYAGRPGTVGDRGGNMVTQSADLLLVLGIR 295
           PVV+           H    G  G  G    NM   +ADL+  +G+R
Sbjct: 237 PVVSTLMGLGVFPGTHKNSLGMLGMHGVYEANMAMHNADLIFGVGVR 283