Pairwise Alignments

Query, 626 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 241 a.a., Polysaccharide export protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 47.0 bits (110), Expect = 9e-10
 Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 10/180 (5%)

Query: 120 PEARDFTA--PTTSAIPDDYRLNPGDQLRLDLSGSVQANDVLLTIDSEGRIFVPKVGTLT 177
           P+AR+  A  P + AIP  Y + PGD+L +    + + ++ +L +  +G + V   G + 
Sbjct: 33  PKARNAQAFAPWSEAIPP-YLIGPGDRLAISYPRTPELDETVLVLP-DGAVSVKTAGVVD 90

Query: 178 VGGTRYGDIHDAIAREVSRQYRNFELQVSVARLKGLTVYVTGFAARPGAYTVSSLSTLVN 237
           V      +    + +   +  R+  + V+V       V V G   +PGAY ++  + ++ 
Sbjct: 91  VLDLSVAETTAKLTQAARKMLRDPLVTVAVVEAATAKVSVAGAVEKPGAYPLTGRAGIME 150

Query: 238 AVLAAGGPSAGGSFRSIQL-RRNGKLVSDFDHYDL--LLRGDKSGDAA---LQNGDVIHI 291
           AV  AGG         + L RRN          DL   L G  S + A   L  GD++ +
Sbjct: 151 AVAQAGGFRDEALLSKVALIRRNPANKPMLRLVDLQGFLEGGTSAETADVPLYVGDIVFV 210



 Score = 34.3 bits (77), Expect = 6e-06
 Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 14/124 (11%)

Query: 300 VIGSVNREAIYEVAPDETIEAALRYAGGASSVADASRLMLLDTLGQREIGWQELTPAASR 359
           +IG  +R AI      E  E  L    GA SV  A  + +LD           L+ A + 
Sbjct: 52  LIGPGDRLAISYPRTPELDETVLVLPDGAVSVKTAGVVDVLD-----------LSVAETT 100

Query: 360 TRIAQRGDIIRVLSD-IGIARPVSQQPVLVTISGEVSKPGRYYVQPGTRLADVVAQAGGL 418
            ++ Q     ++L D +     V      V+++G V KPG Y +     + + VAQAGG 
Sbjct: 101 AKLTQAAR--KMLRDPLVTVAVVEAATAKVSVAGAVEKPGAYPLTGRAGIMEAVAQAGGF 158

Query: 419 TGDA 422
             +A
Sbjct: 159 RDEA 162



 Score = 23.9 bits (50), Expect = 0.008
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 14/84 (16%)

Query: 523 VGVFGAVPSPASFAYHDGRTIGDFIETAGGIQKLGDRKEIFVVR---ANGTVLS------ 573
           V V GAV  P ++       I + +  AGG +      ++ ++R   AN  +L       
Sbjct: 128 VSVAGAVEKPGAYPLTGRAGIMEAVAQAGGFRDEALLSKVALIRRNPANKPMLRLVDLQG 187

Query: 574 --DGRATLRAKALP---GDLVFVP 592
             +G  +     +P   GD+VFVP
Sbjct: 188 FLEGGTSAETADVPLYVGDIVFVP 211