Pairwise Alignments

Query, 313 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Sphingobium sp. HT1-2

Subject, 335 a.a., transcriptional activator FtrA from Pseudomonas fluorescens FW300-N2E2

 Score =  147 bits (371), Expect = 3e-40
 Identities = 99/307 (32%), Positives = 155/307 (50%), Gaps = 4/307 (1%)

Query: 4   VAMVLTPGFQFLALG-AQAAFELANVVVEDAFYTLGIYSVGGGPVASSSGFEIPTVPLGE 62
           VA++   G      G A   F L    ++  +YT  + +V  GP+ +  G +I      E
Sbjct: 1   VAILAYEGLCVFEFGIALEIFGLPRPELDIPWYTHQVVAVDQGPMRAFGGLQIGVDAGLE 60

Query: 63  AGPVDTLLLMAGLMP--PPPQDAETLAVLQATALPARRIAGLCTGAFLLAQMGLLDGRRA 120
           A      +++ G      PP +A   A+ +A A  AR ++ +C+G F+LA  GLLDG  A
Sbjct: 61  ALETARTIIVPGWRSRQEPPPEALLQALRKAHARGARLLS-ICSGVFVLAATGLLDGETA 119

Query: 121 TTHWAYARMMRDGFPDVRVEEDRIFINEGSVWTSAGLTAGLDVVVAMVEKDLGADVARSV 180
           TTHW +A+ + + +P + V+ + ++++ G + TSAG  AG+D  + ++ +D G  VA SV
Sbjct: 120 TTHWQFAQELAEHYPLINVDPNVLYVDAGQLITSAGSAAGIDACLHLIARDCGTHVANSV 179

Query: 181 ARRLVMHHRRAGGQSQHSEMLDLAPSSDRIQKALVHARSHLQNPLTVEELADVAALSPRQ 240
           ARRLVM  +R GGQ+Q           + +   L   R +L    +V ++A   A+S R 
Sbjct: 180 ARRLVMAPQRTGGQAQFIVAPVSKSPRNELSGVLQWIRENLDQSPSVGDMAARVAMSERT 239

Query: 241 FSRAFRAETGQSPAKAVEQLRLEAARLLLEDTRHSLEAVAREVGFIDLRRMREVFMRNYG 300
           F R F   TG +P   ++Q RL  AR LLE T     ++A+  G+  +   R  F    G
Sbjct: 240 FLRRFIETTGLAPKAWLQQERLNRARELLESTDQHTASIAQACGYRSVESFRAAFRNAVG 299

Query: 301 QPPQALR 307
            PP   R
Sbjct: 300 LPPSTYR 306