Pairwise Alignments

Query, 313 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Sphingobium sp. HT1-2

Subject, 333 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  129 bits (325), Expect = 7e-35
 Identities = 84/310 (27%), Positives = 149/310 (48%), Gaps = 3/310 (0%)

Query: 1   MPHVAMVLTPGFQFLALGAQAAFELANVVVEDAFYTLGIYSVGGGPVASSSGFEIPT-VP 59
           +P+V++++  GF    +   +        + +AF+ L   +   G + S  G EI     
Sbjct: 19  VPNVSVIVFNGFSPFHISVPSIV-FGRDTLNEAFFNLQFIAGEEGSIMSDIGMEIHARAK 77

Query: 60  LGEAGPVDTLLLMAGLMPPPPQDAETLAVLQATALPARRIAGLCTGAFLLAQMGLLDGRR 119
           L      D +++          + + +  L+        I GLC G ++LA  GLLDG+R
Sbjct: 78  LDTLEKADIIIVPYWRTVDERPNDQLIEALRLAHERGTLIVGLCLGGYVLAFAGLLDGKR 137

Query: 120 ATTHWAYARMMRDGFPDVRVEEDRIFINEGSVWTSAGLTAGLDVVVAMVEKDLGADVARS 179
           A THW   +     FP+  ++ + +++ +G V TSAG  AG+D  + +  K   + +A  
Sbjct: 138 AATHWELEQDFTQRFPETLLDTNALYVEDGGVITSAGTAAGIDCCLFVFRKYYSSAIANR 197

Query: 180 VARRLVMHHRRAGGQSQHSEM-LDLAPSSDRIQKALVHARSHLQNPLTVEELADVAALSP 238
           +ARR+V+   R GGQ+Q  E  + +  S  RI + +   R+ + +  T++ELA+   ++ 
Sbjct: 198 IARRMVVPPYRDGGQAQFIEQPIPITTSDLRINELMERIRNDIGHKYTLDELAESVMMTR 257

Query: 239 RQFSRAFRAETGQSPAKAVEQLRLEAARLLLEDTRHSLEAVAREVGFIDLRRMREVFMRN 298
           R F+R F   TG +  + +   RL  A+ LLE T  ++E +  + GF  +   R+ F   
Sbjct: 258 RTFTRKFHKATGMAFGEWLASERLNLAQELLESTDLTIEQIVTKTGFSSVFIFRDKFKGR 317

Query: 299 YGQPPQALRR 308
           Y   P   R+
Sbjct: 318 YAVTPNRWRK 327