Pairwise Alignments

Query, 383 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 50/244 (20%), Positives = 100/244 (40%), Gaps = 13/244 (5%)

Query: 11  VRRYNERLILATVRRLNGASKADLSRITGLSPQAAVRIVESLADEGRLIKAGKRTGGMGQ 70
           V++ N   +   + +    S+  ++ ++ L+P +  +I   L + G + +  ++    G+
Sbjct: 12  VKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQQASTGGR 71

Query: 71  PSIIYRINGGSGCTIGAEIGRDRLVCTMLDFDGRIIACESTTTSYPSP----ASAVELIQ 126
            +I          +I   IGRD +  ++ D  G  +  E     Y +     +S ++ I+
Sbjct: 72  RAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLMSSLIKQIK 131

Query: 127 CFAQKHLPQLREEQREGFLGFGIAMPWFIGEWREEAGIAAQQA-AAWAAPGLEEYFQKEL 185
            F Q+H   + +      +  G+A+P  +     E G+       A     L    + E 
Sbjct: 132 QFIQQHTALIDQ-----LIAIGVALPGLVNP---ETGVVEYMPNVAINELPLGATIRDEF 183

Query: 186 DGPVIFENDGNAGALAELMSGSAVGLTNFLYVHIGSFVGGGLILNGEIKRGKNGNAGALA 245
                  ND    ALAE   G++    + + V +    G G+I+NG++  G N N G + 
Sbjct: 184 HVECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIG 243

Query: 246 SMPI 249
            + I
Sbjct: 244 HIQI 247