Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, LacI family from Sphingobium sp. HT1-2

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  145 bits (367), Expect = 1e-39
 Identities = 105/325 (32%), Positives = 158/325 (48%), Gaps = 7/325 (2%)

Query: 5   IKDVARVAEVSPATVSRVLSG-RAVDPAMRDRVLAAVRTTGYRPNLAARRLRSRHSNTIG 63
           +KDVA++A VS ATVSR L     V  + R RV  AV   GY PN  AR LR   S TI 
Sbjct: 4   MKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIV 63

Query: 64  LIVADIRNPFFTAVSRTVEDIAYERGLRVILCNTDEDPAKEAMYLQLMQEERVTGVILAP 123
            IV DI +P+F+ + R +ED A E G  V+L ++ +   +E  ++ L+  ++  G++L  
Sbjct: 64  AIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLG 123

Query: 124 TRQ--GAKKASQTKAEHPIILIDRVAATTTDCVVLDNDAMARTLVAHLHAQGFRSITGLF 181
           T       K  Q      ++  +         V +DN   A   V +L   G + I  + 
Sbjct: 124 TDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQIS 183

Query: 182 GAASTTGAE-RRAGFEQAAQMIGIPTRSLSVPHGEGEAE---RLVSALLQTPDRPEAIIA 237
           G       + R  G++QA +  GI         G+   E   + V  LL  P++P AI  
Sbjct: 184 GPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTAIFC 243

Query: 238 SNGLMLMSVLRAAHALGLSVPGDFALAGFDNDTWTEFAADGLSVIEQPVEEIGRTAMAML 297
            N  M +  ++ A  LGL VP D ++ GFD+  + ++    L+ I QP  EIGR AM M+
Sbjct: 244 HNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMM 303

Query: 298 LDRLDHPNAAARKVVLSGRLIIRGS 322
           L+ L   +  A   +L  +L++R S
Sbjct: 304 LELLRGHDVRAGSRLLETKLVVRES 328