Pairwise Alignments

Query, 224 a.a., Transposase from Sphingobium sp. HT1-2

Subject, 252 a.a., ISSod6, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 34/185 (18%)

Query: 2   REIVNAIFYVLRGGITWRLLPKDFPPWQTVYRWFARLRDEAVFERMNHALV-MADRDRT- 59
           R+    I Y LR GI WR LPK+F  W TV+R F     + V   +  AL  +AD +   
Sbjct: 31  RQTFEGILYRLRTGIPWRDLPKEFGHWSTVFRRFHLWSKKGVLAHLFKALANLADIEWVF 90

Query: 60  -------GREASPSAAIIDSQSVKTTESGGPRGYDAGKKIEGRKRHALVDTDGRALLVEP 112
                    + S  AA + ++S+  +  G              K H  VD+ G  +  E 
Sbjct: 91  IDGSIVRAHQHSAGAATLSNESIGKSRGG-----------NSTKIHLAVDSGGLPIYFE- 138

Query: 113 HTADVQDRDGGGAVPQISRGLFPFIEKVWADGGYNHERVTQATSITVGIISKITGQTGFV 172
             ++ Q  D   A   I       ++ V AD GY+ +   +           I  + G  
Sbjct: 139 -LSEGQKHDITHAPSLIEH--LKQVDTVIADKGYDSDAFREL----------IANKGGKS 185

Query: 173 VLPRR 177
           V+PRR
Sbjct: 186 VIPRR 190