Pairwise Alignments

Query, 505 a.a., GAF domain/GGDEF domain/EAL domain protein from Sphingobium sp. HT1-2

Subject, 907 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  113 bits (282), Expect = 3e-29
 Identities = 78/270 (28%), Positives = 123/270 (45%), Gaps = 17/270 (6%)

Query: 231 HADDQPKAWEKWRHSLASGDPYEIEYRLRHRDGLYRW--TLGRALPIRDAQGQIIRWIGT 288
           H DD P    +   ++ +   Y + YR +  DG  RW    G+  P     G   R  G 
Sbjct: 641 HPDDLPLIEREMARAIETDGDYHVVYRAQLPDGTIRWMEAFGQLSP---RNGPKRRLTGV 697

Query: 289 CTEIHEQKLMLEEREMIAHELSHRIKNIFSVIAGLIGLSARERPGMQEGADDLRDRILAL 348
           C +I E++    +R ++  ELSHR+KN  +++  +   +    P  +        RI AL
Sbjct: 698 CMDITERREAEAQRNLLVAELSHRVKNTLAIVGSIARQTFSTNPDAKAAHRSFDARIRAL 757

Query: 349 GRAHD-FVRTHGGGVSMADEQASLHGVLEEIFAPYGGRERLQLSGDNPP--IDDRSATPL 405
            + H         GVS       L  VL +  +PY    R  ++   PP  +  + A  L
Sbjct: 758 AQTHTRLAEASWSGVS-------LKTVLFDELSPYHDDSRTNVTLAGPPAMLPPKHALTL 810

Query: 406 ALLFHELATNAAKYGALSTPDGFIALH--VVTQDEDILLDWREEGGPSVAPIASEGFGSR 463
            +  HELATNAAK+GALS   G + +   +    E + + W E GGP+V      GFG  
Sbjct: 811 GMAAHELATNAAKHGALSVRSGKVDIEWMIDVASERLRICWSETGGPAVVAPKHNGFGRL 870

Query: 464 LIALSVERQLGGQLERQWCPEGLRLSLRIP 493
           L+   +   LGG++  ++ P+GL  ++ +P
Sbjct: 871 LLERVLASDLGGEVHLEFAPQGLVCTIDVP 900



 Score = 29.3 bits (64), Expect = 6e-04
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 255 EYRLRHRDGLYRWTLGRALPIRDAQGQIIRWIGTCTEIHEQK 296
           E  +R  DG  R   G A P+RD  G+++  +    +I  +K
Sbjct: 537 EEEVRFDDGSSRHIFGNATPLRDVTGEVVGAVAAAVDITGRK 578