Pairwise Alignments

Query, 505 a.a., GAF domain/GGDEF domain/EAL domain protein from Sphingobium sp. HT1-2

Subject, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

 Score = 80.9 bits (198), Expect = 2e-19
 Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 10/177 (5%)

Query: 145 LSLLARQVMVELEGRRRDRDVIAQQRLDAAAVADSDRMFRTLADTMPQMVWSTLPDGYHD 204
           L++ A   ++     R+ +  ++  +   A + + +R    + + +P  +    P+G   
Sbjct: 277 LAISAFSALIVAAISRQYQLALSNLQQSVATLRERERELSQIVNMVPVHIRRLTPEGEPT 336

Query: 205 YYNARWYEYTGV-------PAGSTDGDAWNGMFHADDQPKAWEKWRHSLASGDPYEIEYR 257
           ++N R  ++ G+       P  S    A   + H DD     +  R SLA+G+PY I+YR
Sbjct: 337 FFNKRLTDFFGLDLQQLEKPNASRLVTAVQTLVHPDDADSLLQAVRRSLATGEPYSIKYR 396

Query: 258 LRHRDGLYRWTLGRALPIRDAQGQIIRWIGTCTEIHEQKLM---LEEREMIAHELSH 311
           +R  DG YRW  GRA P+RD  G I++W     +I ++  M   L++ E    EL H
Sbjct: 397 MRRADGAYRWVDGRAEPLRDDSGTILQWFAISIDIDDEVRMQEALKQSERRYRELFH 453



 Score = 80.5 bits (197), Expect = 3e-19
 Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 8/138 (5%)

Query: 164 DVIAQQRLDAAAVADSDRMFRTLADTMPQMVWSTLPDGYHDYYNARWYEYTGVPAGSTDG 223
           D+  ++R + A  A  +R F  L + +P  +W   PDG  ++ N R  ++ G    + + 
Sbjct: 586 DITERKRAEEALRA-REREFSQLVNMVPSYLWRLTPDGVPNFLNQRLIDFLGPDVVNANV 644

Query: 224 DAWN-------GMFHADDQPKAWEKWRHSLASGDPYEIEYRLRHRDGLYRWTLGRALPIR 276
           +  +        + H DD+ +      HS+A+G+ + ++YRLR  DG+YRW  G A P+R
Sbjct: 645 EGVHPLAAIIGAVVHPDDKTRMSNALFHSVATGERFSMKYRLRRADGVYRWVEGSAEPMR 704

Query: 277 DAQGQIIRWIGTCTEIHE 294
           D +G+I++W G   +I +
Sbjct: 705 DEEGRILQWYGLSHDIDD 722



 Score = 79.3 bits (194), Expect = 7e-19
 Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 7/143 (4%)

Query: 175 AVADSDRMFRTLADTMPQMVWSTLPDGYHDYYNARWYEYTGVPAGSTDGDAWNGM----- 229
           A+ + +R    L +T+P M+    P+G   Y + +  ++ G      DG A + +     
Sbjct: 857 ALRERERFLWQLVETLPAMIDCAAPNGEPVYRSQQLRDFLGYELEELDGGAKSRLDATLD 916

Query: 230 --FHADDQPKAWEKWRHSLASGDPYEIEYRLRHRDGLYRWTLGRALPIRDAQGQIIRWIG 287
              H DD     E++  SL SG+PY  ++RLR  DG YRW   RA P+RD +G I++W  
Sbjct: 917 AGVHPDDLAGVKEQYARSLESGEPYRRKHRLRRFDGEYRWIETRAAPMRDEKGAIVQWNV 976

Query: 288 TCTEIHEQKLMLEEREMIAHELS 310
            C ++  +  M EE  +    L+
Sbjct: 977 ICLDVDREVRMQEELRLAQERLA 999



 Score = 66.2 bits (160), Expect = 6e-15
 Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 5/140 (3%)

Query: 175 AVADSDRMFRTLADTMPQMVWSTLPDGYHDYYNARWYEYTGVPAGST-DGDAW-NGMFHA 232
           A+ +S +    + + +P    S  P G   Y + R+ +  G P     D DA    + H 
Sbjct: 729 ALRNSKQQLEQMIEAVPFSTLSFAPTGELTYVSKRYQDQAGAPGAEIKDFDALAREVAHP 788

Query: 233 DDQPKAWEKWRHSLASGDPYEIEYRLRHRDGLYRWTLGRALPIRDAQGQIIRWIGTCTEI 292
           DD P  + +     A+G P+   +R R +DG YRW   RA P+R A G I++W     +I
Sbjct: 789 DDFPTMFARATQGFATGQPFVNRFRRRLKDGNYRWIEARAQPLRRADGPIVQWYFASIDI 848

Query: 293 HEQ---KLMLEEREMIAHEL 309
            E+   +  L ERE    +L
Sbjct: 849 EEEMRAQEALRERERFLWQL 868